RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ARL2BPQ9Y2Y0 163 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 SUGT1Q9Y2Z0 365 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 PHLPP1O60346 1717 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 CALCAP01258 141 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 EPHB2P29323 1055 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 HOXD13P35453 343 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 RPS8P62241 208 aaKnown RBP15.62■□□□□ 0.09
SCARF1-209ENST00000576012 RIPK1Q13546 671 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 EAPPQ56P03 285 aaPredicted RBP15.62■□□□□ 0.09
SCARF1-209ENST00000576012 C10orf76Q5T2E6 689 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 RNF220Q5VTB9 566 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 SLC35C1Q96A29 364 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 RPS6KC1Q96S38 1066 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 SPZ1Q9BXG8 430 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 SIX2Q9NPC8 291 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 DLGAP2Q9P1A6 1054 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 PARP4Q9UKK3 1724 aaKnown RBP15.62■□□□□ 0.09
SCARF1-209ENST00000576012 COL4A1P02462 1669 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 FTLP02792 175 aaPredicted RBP15.62■□□□□ 0.09
SCARF1-209ENST00000576012 COMTP21964 271 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 FBXO33Q7Z6M2 555 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 SLFN11Q7Z7L1 901 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 EIF1ADQ8N9N8 165 aaKnown RBP15.62■□□□□ 0.09
SCARF1-209ENST00000576012 DTX3LQ8TDB6 740 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 UTP4Q969X6 686 aaKnown RBP15.62■□□□□ 0.09
SCARF1-209ENST00000576012 MYLK2Q9H1R3 596 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 BSDC1Q9NW68 430 aaPredicted RBP15.62■□□□□ 0.09
SCARF1-209ENST00000576012 IRAK4Q9NWZ3 460 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 RGL1Q9NZL6 768 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 PCDHA2Q9Y5H9 948 aa15.62■□□□□ 0.09
SCARF1-209ENST00000576012 SLIT2O94813 1529 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 A0A1B0GVG6 124 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 RFC5P40937 340 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 SIK1P57059 783 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 C2CD6Q53TS8 623 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 TMEM154Q6P9G4 183 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 VSTM1Q6UX27 236 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 SRP68Q9UHB9 627 aaKnown RBP15.61■□□□□ 0.09
SCARF1-209ENST00000576012 TNS2Q63HR2 1409 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 USP17L10C9JJH3 530 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 FOXN3O00409 490 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-209ENST00000576012 CES2O00748 559 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 CLDN3O15551 220 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 THAP12O43422 761 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 GM2AP17900 193 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 BLMHQ13867 455 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 TMED2Q15363 201 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 CBWD6Q4V339 395 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 CBWD3Q5JTY5 395 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 CBWD5Q5RIA9 395 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 COL23A1Q86Y22 540 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-209ENST00000576012 TRIM7Q9C029 511 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 DHX36Q9H2U1 1008 aaKnown RBP15.61■□□□□ 0.09
SCARF1-209ENST00000576012 PSTPIP2Q9H939 334 aa15.61■□□□□ 0.09
SCARF1-209ENST00000576012 PDIA5Q14554 519 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 SLC30A9Q6PML9 568 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 UCMAQ8WVF2 138 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 SYT15Q9BQS2 421 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 HEMGNQ9BXL5 484 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 PCIF1Q9H4Z3 704 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 PPP1R11O60927 126 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 SOX5P35711 763 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 RBBP5Q15291 538 aaKnown RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 MUM1Q2TAK8 710 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 SEL1L2Q5TEA6 688 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 ANO7Q6IWH7 933 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 CATSPER3Q86XQ3 398 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 TAB3Q8N5C8 712 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 ARHGEF3Q9NR81 526 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 NKIRAS1Q9NYS0 192 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 G3BP2Q9UN86 482 aaKnown RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 LRRD1A4D1F6 860 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 PHF2O75151 1096 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 FERP16591 822 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 VCAM1P19320 739 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 PTGIRP43119 386 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 BTDP43251 543 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 ZNF131P52739 623 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 CCDC6Q16204 474 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 APBB1IPQ7Z5R6 666 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 FAM186BQ8IYM0 893 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 MYCT1Q8N699 235 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 CNBD1Q8NA66 436 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 SEC14L1Q92503 715 aa15.6■□□□□ 0.09
SCARF1-209ENST00000576012 NAP1L3Q99457 506 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 ALG13Q9NP73 1137 aaKnown RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 PAPOLBQ9NRJ5 636 aaKnown RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 CORO1CQ9ULV4 474 aaPredicted RBP15.6■□□□□ 0.09
SCARF1-209ENST00000576012 POC1B-GALNT4F8VUJ3 575 aa15.59■□□□□ 0.09
SCARF1-209ENST00000576012 TBCAO75347 108 aaKnown RBP15.59■□□□□ 0.09
SCARF1-209ENST00000576012 CETPP11597 493 aa15.59■□□□□ 0.09
SCARF1-209ENST00000576012 CGB2Q6NT52 195 aa15.59■□□□□ 0.09
SCARF1-209ENST00000576012 DPY19L2P1Q6NXN4 242 aa15.59■□□□□ 0.09
SCARF1-209ENST00000576012 DPP8Q6V1X1 898 aaPredicted RBP15.59■□□□□ 0.09
SCARF1-209ENST00000576012 C4orf33Q8N1A6 199 aa15.59■□□□□ 0.09
SCARF1-209ENST00000576012 TEKT4Q8WW24 435 aa15.59■□□□□ 0.09
SCARF1-209ENST00000576012 KIAA1683Q9H0B3 1180 aa15.59■□□□□ 0.09
SCARF1-209ENST00000576012 RXFP1Q9HBX9 757 aa15.59■□□□□ 0.09
SCARF1-209ENST00000576012 DCTN4Q9UJW0 460 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms