RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	KCNG1	Q9UIX4	513 aa		27.96	■■■□□ 2.07
SRRM2-223	ENST00000575701	HIP1R	O75146	1068 aa		27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	NCL	P19338	710 aa	Known RBP	27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	DMP1	Q13316	513 aa	Predicted RBP	27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	STK38	Q15208	465 aa		27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	CCDC85B	Q15834	202 aa	Predicted RBP	27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	HACE1	Q8IYU2	909 aa		27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	KRI1	Q8N9T8	703 aa	Known RBP	27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	SPRYD3	Q8NCJ5	442 aa		27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	HELQ	Q8TDG4	1101 aa		27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	CWH43	Q9H720	699 aa		27.95	■■■□□ 2.06
SRRM2-223	ENST00000575701	CARNS1	A5YM72	827 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	YEATS4	O95619	227 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	BECN1	Q14457	450 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	KARS	Q15046	597 aa	Known RBP	27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	TIGD5	Q53EQ6	642 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	SLC27A1	Q6PCB7	646 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	DAW1	Q8N136	415 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	CPB2	Q96IY4	423 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	TRIM6	Q9C030	488 aa	Predicted RBP	27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	CCDC113	Q9H0I3	377 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	UBN1	Q9NPG3	1134 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701	CCDC39	Q9UFE4	941 aa		27.94	■■■□□ 2.06
SRRM2-223	ENST00000575701		A0A1B0GUA9	196 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	PRKCB	P05771	671 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	PLCG1	P19174	1290 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	MAPK7	Q13164	816 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	ATL3	Q6DD88	541 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	COLGALT1	Q8NBJ5	622 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	LINC00301	Q8NCQ3	95 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	SLC17A8	Q8NDX2	589 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	LPP	Q93052	612 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	PLAGL2	Q9UPG8	496 aa		27.93	■■■□□ 2.06
SRRM2-223	ENST00000575701	PRRC2B	Q5JSZ5	2229 aa	Known RBP	27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	ACKR2	O00590	384 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	B4GALT5	O43286	388 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	PPP6R2	O75170	966 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	PEX3	P56589	373 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	PRPF4B	Q13523	1007 aa	Known RBP	27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	27.92	■■■□□ 2.06	2e-6	■□□□□ 10.5
SRRM2-223	ENST00000575701	KLHL23	Q8NBE8	558 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	RAD54L	Q92698	747 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	SYMPK	Q92797	1274 aa	Known RBP	27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	EPSTI1	Q96J88	318 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	RSAD1	Q9HA92	442 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	BLOC1S4	Q9NUP1	217 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	RBM19	Q9Y4C8	960 aa	Known RBP	27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	IPP	Q9Y573	584 aa		27.92	■■■□□ 2.06
SRRM2-223	ENST00000575701	CCDC169	A6NNP5	214 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	N4BP3	O15049	544 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	GRM6	O15303	877 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	PPM1A	P35813	382 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	NPTX2	P47972	431 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	UBE3A	Q05086	875 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	NOMO2	Q5JPE7	1267 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	AGMO	Q6ZNB7	445 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	LRRC55	Q6ZSA7	311 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	SMG8	Q8ND04	991 aa	Known RBP	27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	URGCP	Q8TCY9	931 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	LARP4B	Q92615	738 aa	Known RBP	27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	ZNF558	Q96NG5	402 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	EIF2A	Q9BY44	585 aa	Known RBP	27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	POLD4	Q9HCU8	107 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	KMT5A	Q9NQR1	393 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	STK17A	Q9UEE5	414 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	ODF2L	Q9ULJ1	636 aa		27.91	■■■□□ 2.06
SRRM2-223	ENST00000575701	SPTLC2	O15270	562 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	OFD1	O75665	1012 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	ITGB1	P05556	798 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	ITGA4	P13612	1032 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	TMEM132A	Q24JP5	1023 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	FOXD4L5	Q5VV16	416 aa	Predicted RBP	27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	THNSL1	Q8IYQ7	743 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	CLIC6	Q96NY7	704 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	KIFC3	Q9BVG8	833 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	TMEM134	Q9H6X4	195 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	ARHGAP28	Q9P2N2	729 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	KANSL3	Q9P2N6	904 aa		27.9	■■■□□ 2.06
SRRM2-223	ENST00000575701	EYS	Q5T1H1	3165 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	ZMYM2	Q9UBW7	1377 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	MEIS3P2	A8K0S8	358 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701		K7ERI5	159 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	PLS3	P13797	630 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	PKP1	Q13835	747 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	LONRF3	Q496Y0	759 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	SPECC1	Q5M775	1068 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	GPBP1	Q86WP2	473 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	SPIRE2	Q8WWL2	714 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	ADPGK	Q9BRR6	497 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	NTPCR	Q9BSD7	190 aa	Known RBP	27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	ALG13	Q9NP73	1137 aa	Known RBP	27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	LARS	Q9P2J5	1176 aa	Known RBP	27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	THEG	Q9P2T0	379 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	TFIP11	Q9UBB9	837 aa	Known RBP	27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	HCST	Q9UBK5	93 aa		27.89	■■■□□ 2.06
SRRM2-223	ENST00000575701	LIG1	P18858	919 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	DDIT3	P35638	169 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	SMTN	P53814	917 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	SKIV2L	Q15477	1246 aa	Known RBP	27.88	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms