RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CSRNP2Q9H175 543 aa9.62□□□□□ -0.87
SMG6-216ENST00000575176 NXF3Q9H4D5 531 aaKnown RBP9.62□□□□□ -0.87
SMG6-216ENST00000575176 PDZD7Q9H5P4 517 aa9.62□□□□□ -0.87
SMG6-216ENST00000575176 TYW1Q9NV66 732 aaKnown RBP9.62□□□□□ -0.87
SMG6-216ENST00000575176 LMCD1Q9NZU5 365 aa9.62□□□□□ -0.87
SMG6-216ENST00000575176 PCDHGC5Q9Y5F6 944 aa9.62□□□□□ -0.87
SMG6-216ENST00000575176 SRPRBQ9Y5M8 271 aaKnown RBP9.62□□□□□ -0.87
SMG6-216ENST00000575176 MTCL1Q9Y4B5 1905 aaKnown RBP9.62□□□□□ -0.87
SMG6-216ENST00000575176 PHLPP2Q6ZVD8 1323 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 NPHP3-ACAD11A0A0J9YXS1 232 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 TBKBP1A7MCY6 615 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 FSCN2O14926 492 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 SLC26A4O43511 780 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 HIP1RO75146 1068 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 OFD1O75665 1012 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 BRD1O95696 1058 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 EOMESO95936 686 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 BMP15O95972 392 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 F13A1P00488 732 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 RB1P06400 928 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 STAG3L1P0CL83 205 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 ZSCAN22P10073 491 aaPredicted RBP9.61□□□□□ -0.87
SMG6-216ENST00000575176 NCLP19338 710 aaKnown RBP9.61□□□□□ -0.87
SMG6-216ENST00000575176 PROZP22891 400 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 MARCKSP29966 332 aaPredicted RBP9.61□□□□□ -0.87
SMG6-216ENST00000575176 NPTX2P47972 431 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 DSC1Q08554 894 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 PCBP1Q15365 356 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMG6-216ENST00000575176 E2F4Q16254 413 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 SPECC1Q5M775 1068 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 AXDND1Q5T1B0 1012 aaPredicted RBP9.61□□□□□ -0.87
SMG6-216ENST00000575176 NT5DC1Q5TFE4 455 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 KRT79Q5XKE5 535 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 ADGRD2Q7Z7M1 963 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 CABP7Q86V35 215 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMG6-216ENST00000575176 RNF168Q8IYW5 571 aaPredicted RBP9.61□□□□□ -0.87
SMG6-216ENST00000575176 LRRC43Q8N309 656 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 KLHL23Q8NBE8 558 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 SPPL3Q8TCT6 385 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
SMG6-216ENST00000575176 CCDC51Q96ER9 411 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 PRIMPOLQ96LW4 560 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 SCLT1Q96NL6 688 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 PLVAPQ9BX97 442 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 PTPRHQ9HD43 1115 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 TBC1D13Q9NVG8 400 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 PLAGL2Q9UPG8 496 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 HES2Q9Y543 173 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 IPPQ9Y573 584 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 PCDHB2Q9Y5E7 798 aa9.61□□□□□ -0.87
SMG6-216ENST00000575176 LRRIQ4A6NIV6 560 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 F8W810 466 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 FAM189A1O60320 539 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 DDHD2O94830 711 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 GLP2RO95838 553 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 PLA2G4BP0C869 781 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 AXLP30530 894 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 GTF2F1P35269 517 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMG6-216ENST00000575176 LTBRP36941 435 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 RAB27AP51159 221 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 TFF2Q03403 129 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 GPM6BQ13491 265 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 KCNC3Q14003 757 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 TWF2Q6IBS0 349 aaKnown RBP9.6□□□□□ -0.87
SMG6-216ENST00000575176 ZNF280BQ86YH2 543 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 SLC39A11Q8N1S5 342 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 TMEM161BQ8NDZ6 487 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 VN1R2Q8NFZ6 395 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 RAD54LQ92698 747 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 PLIN2Q99541 437 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 REEP2Q9BRK0 252 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 C11orf84Q9BUA3 381 aaPredicted RBP9.6□□□□□ -0.87
SMG6-216ENST00000575176 RAB34Q9BZG1 259 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 INO80BQ9C086 356 aaPredicted RBP9.6□□□□□ -0.87
SMG6-216ENST00000575176 HAPLN2Q9GZV7 340 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 ZSCAN16Q9H4T2 348 aaPredicted RBP9.6□□□□□ -0.87
SMG6-216ENST00000575176 ALG13Q9NP73 1137 aaKnown RBP9.6□□□□□ -0.87
SMG6-216ENST00000575176 MARCH5Q9NX47 278 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 MIOSQ9NXC5 875 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 DNAJB4Q9UDY4 337 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 PCDHB7Q9Y5E2 793 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 STK24Q9Y6E0 443 aa9.6□□□□□ -0.87
SMG6-216ENST00000575176 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.59□□□□□ -0.87
SMG6-216ENST00000575176 FRMD3A2A2Y4 597 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 INO80B-WBP1J3KQ70 363 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 PTGESO14684 152 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 TBX10O75333 385 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 PPP1R37O75864 691 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 YEATS4O95619 227 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 PRKCBP05771 671 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
SMG6-216ENST00000575176 ZSCAN20P17040 1043 aaPredicted RBP9.59□□□□□ -0.87
SMG6-216ENST00000575176 IGFBP4P22692 258 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 NCKAP1LP55160 1127 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 PLCB3Q01970 1234 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms