RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 KIF4AO95239 1232 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 VIMP08670 466 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 CHN1P15882 459 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 CCNHP51946 323 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 HMGCS2P54868 508 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 RNASELQ05823 741 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 CEP55Q53EZ4 464 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 WLSQ5T9L3 541 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 DCAF12L1Q5VU92 463 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 LLGL2Q6P1M3 1020 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 TMC3Q7Z5M5 1100 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 RPAINQ86UA6 219 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 IL31RAQ8NI17 732 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 TAAR1Q96RJ0 339 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ELAC2Q9BQ52 826 aaKnown RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ADAM7Q9H2U9 754 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ZHX2Q9Y6X8 837 aa9.19□□□□□ -0.94
RPAIN-215ENST00000575112 ASTN2O75129 1339 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-215ENST00000575112 FTLP02792 175 aaPredicted RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 MYL1P05976 194 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 PPP1R2P41236 205 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 ACOT2P49753 483 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 SWSAP1Q6NVH7 229 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 CD302Q8IX05 232 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 LRRC34Q8IZ02 419 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 MREGQ8N565 214 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 TTLL6Q8N841 843 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 DAGLBQ8NCG7 672 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 SCFD2Q8WU76 684 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 ACSF2Q96CM8 615 aaPredicted RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 PRMT1Q99873 361 aaKnown RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 FAM213AQ9BRX8 229 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 EHMT1Q9H9B1 1298 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 MAGEF1Q9HAY2 307 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 RNF19AQ9NV58 838 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 ZNF70Q9UC06 446 aaPredicted RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 DBR1Q9UK59 544 aaKnown RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 CD19P15391 556 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 CTNNA2P26232 953 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 PON1P27169 355 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 GLE1Q53GS7 698 aaKnown RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 IRF2BP2Q7Z5L9 587 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 YTHDF3Q7Z739 585 aaKnown RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 CACNA2D3Q8IZS8 1091 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 C1orf54Q8WWF1 131 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 UNC45AQ9H3U1 944 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 NOD2Q9HC29 1040 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 PPP1R9AQ9ULJ8 1098 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 ARAP2Q8WZ64 1704 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 ATP6V1G2O95670 118 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 SRGAP2CP0DJJ0 459 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 DPEP1P16444 411 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 DYNLT1P63172 113 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 MTMR1Q13613 665 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 LRRC57Q8N9N7 239 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 EPS8L3Q8TE67 593 aaKnown RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 ATP8B4Q8TF62 1192 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 NSMCE1Q8WV22 266 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 TMEM143Q96AN5 459 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 RNF25Q96BH1 459 aaPredicted RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 ZNF653Q96CK0 615 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 NACC1Q96RE7 527 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 KCNG1Q9UIX4 513 aa9.18□□□□□ -0.94
RPAIN-215ENST00000575112 MYH14Q7Z406 1995 aaKnown RBP9.18□□□□□ -0.94
RPAIN-215ENST00000575112 F8VZ95 297 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ACSL3O95573 720 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 FGFR4P22455 802 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 MARCKSL1P49006 195 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 BAATQ14032 418 aaPredicted RBP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ZKSCAN8Q15776 578 aaPredicted RBP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 CBWD6Q4V339 395 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 CBWD3Q5JTY5 395 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 CBWD5Q5RIA9 395 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 STRIP1Q5VSL9 837 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 TLDC1Q6P9B6 456 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 MICALCLQ6ZW33 695 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 RPUSD2Q8IZ73 545 aaKnown RBP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 SLC17A8Q8NDX2 589 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 SLC35G2Q8TBE7 412 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 WHAMMQ8TF30 809 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 WDR18Q9BV38 432 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 THAP2Q9H0W7 228 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 UTP11Q9Y3A2 253 aaKnown RBP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ITGB4P16144 1822 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 GOLGA6L10A0A0M3HER8 536 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 GJB6O95452 261 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 EGFRP00533 1210 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 FOSP01100 380 aaPredicted RBP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ATF7P17544 494 aaPredicted RBP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 IFI16Q16666 785 aaKnown RBP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ZCWPW2Q504Y3 356 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 DACT2Q5SW24 774 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 PPP4R3AQ6IN85 833 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ZDHHC14Q8IZN3 488 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ANKRD35Q8N283 1001 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 AGAP11Q8TF27 550 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 SEMA4AQ9H3S1 761 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms