RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 TRIM6Q9C030 488 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 FZD8Q9H461 694 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 TMEM134Q9H6X4 195 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 TMEM161AQ9NX61 479 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 LAMA3Q16787 3333 aa14.07□□□□□ -0.16
TRAPPC1-206ENST00000573989 NPHP3-ACAD11A0A0J9YXS1 232 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 A0A1B0GVL5 298 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 ACKR2O00590 384 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 N4BP3O15049 544 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 TRAK2O60296 914 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 TSPAN1O60635 241 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 GAP43P17677 238 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 LIG1P18858 919 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 SYKP43405 635 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 ZNF131P52739 623 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 FAM189BP81408 668 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 HTRA4P83105 476 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 PPP2R2DQ66LE6 453 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 DYMQ7RTS9 669 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 CCDC65Q8IXS2 484 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 ABI1Q8IZP0 508 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 PGBD4Q96DM1 585 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 FAM105AQ9NUU6 356 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 KBTBD4Q9NVX7 518 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 ARHGAP28Q9P2N2 729 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 SEL1LQ9UBV2 794 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 CNTNAP2Q9UHC6 1331 aa14.06□□□□□ -0.16
TRAPPC1-206ENST00000573989 MYO9BQ13459 2157 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 MYMKA6NI61 221 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 SLC16A4O15374 487 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 DGKIO75912 1065 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 CA3P07451 260 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 SLFN14P0C7P3 912 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 IDEP14735 1019 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 PFKFB1P16118 471 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 ARF4P18085 180 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 HOXA11P31270 313 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 PBX2P40425 430 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 NCKAP1LP55160 1127 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 AMHR2Q16671 573 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 TPRNQ4KMQ1 711 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 SLC27A1Q6PCB7 646 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 TMCO2Q7Z6W1 182 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 ECHDC2Q86YB7 292 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 FAM178BQ8IXR5 827 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 FSIP1Q8NA03 581 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 RNF169Q8NCN4 708 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 CPB2Q96IY4 423 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 KIFC3Q9BVG8 833 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 MRPL4Q9BYD3 311 aaKnown RBP14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 CCDC113Q9H0I3 377 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 NKX2-4Q9H2Z4 354 aa14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 FNDC1Q4ZHG4 1894 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC1-206ENST00000573989 NLRC5Q86WI3 1866 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 A0A1B0GUA9 196 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 K7ENM7 598 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 ZNF623O75123 536 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 MYL1P05976 194 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 MAPTP10636 758 aaKnown RBP14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 BTG3Q14201 252 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 HAUS6Q7Z4H7 955 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 CMTR2Q8IYT2 770 aaKnown RBP14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 FIBCD1Q8N539 461 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 TMEM161BQ8NDZ6 487 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 UBN1Q9NPG3 1134 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 HPSEQ9Y251 543 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 YBX2Q9Y2T7 364 aaKnown RBP14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 RWDD3Q9Y3V2 267 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 PCDHB2Q9Y5E7 798 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 ADGRA3Q8IWK6 1321 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 COL4A6Q14031 1691 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 RALGAPA2Q2PPJ7 1873 aa14.04□□□□□ -0.16
TRAPPC1-206ENST00000573989 FAM237AA0A1B0GTK4 181 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 B4GALT5O43286 388 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 MYOGP15173 224 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 NDUFA8P51970 172 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 ASIC1P78348 528 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 DCAF4L1Q3SXM0 396 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 ATF7IP2Q5U623 682 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 KANK3Q6NY19 840 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 CNNM4Q6P4Q7 775 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 CRIPAKQ8N1N5 446 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 KCNN1Q92952 543 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 ZNF689Q96CS4 500 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 DNAJC19Q96DA6 116 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 BICD1Q96G01 975 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 SAMD11Q96NU1 681 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 TGS1Q96RS0 853 aaKnown RBP14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 C7orf25Q9BPX7 421 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 TRIM9Q9C026 710 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 TMEM117Q9H0C3 514 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 ZNF576Q9H609 170 aa14.03□□□□□ -0.16
TRAPPC1-206ENST00000573989 MRPL44Q9H9J2 332 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms