RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 TPCN1Q9ULQ1 816 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 PPME1Q9Y570 386 aa24.59■■□□□ 1.53
SNF8-216ENST00000573795 C2orf16Q68DN1 1984 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 CARNS1A5YM72 827 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 ZBTB39O15060 712 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 TBX3O15119 743 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 CCNT1O60563 726 aaKnown RBP24.58■■□□□ 1.53
SNF8-216ENST00000573795 BRD1O95696 1058 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 SRGAP2CP0DJJ0 459 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 AVPR2P30518 371 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 RFC5P40937 340 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 RNASELQ05823 741 aaKnown RBP24.58■■□□□ 1.53
SNF8-216ENST00000573795 LAMTOR4Q0VGL1 99 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 BMS1Q14692 1282 aaKnown RBP24.58■■□□□ 1.53
SNF8-216ENST00000573795 EPHA7Q15375 998 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 PIK3AP1Q6ZUJ8 805 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 SRGAP1Q7Z6B7 1085 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 ZBTB33Q86T24 672 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 PSPC1Q8WXF1 523 aaKnown RBP24.58■■□□□ 1.53
SNF8-216ENST00000573795 PGBD4Q96DM1 585 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 SLKQ9H2G2 1235 aaPredicted RBP24.58■■□□□ 1.53
SNF8-216ENST00000573795 SORCS3Q9UPU3 1222 aa24.58■■□□□ 1.53
SNF8-216ENST00000573795 PFKFB2O60825 505 aa24.57■■□□□ 1.52
SNF8-216ENST00000573795 DKC1O60832 514 aaKnown RBP eCLIP24.57■■□□□ 1.52
SNF8-216ENST00000573795 CDKL5O76039 1030 aa24.57■■□□□ 1.52
SNF8-216ENST00000573795 YWHABP31946 246 aaKnown RBP24.57■■□□□ 1.52
SNF8-216ENST00000573795 GIT2Q14161 759 aa24.57■■□□□ 1.52
SNF8-216ENST00000573795 EMC2Q15006 297 aa24.57■■□□□ 1.52
SNF8-216ENST00000573795 DYDC2Q96IM9 177 aa24.57■■□□□ 1.52
SNF8-216ENST00000573795 RIPOR3Q96MK2 946 aa24.57■■□□□ 1.52
SNF8-216ENST00000573795 RSAD1Q9HA92 442 aa24.57■■□□□ 1.52
SNF8-216ENST00000573795 LILRB3O75022 631 aa24.56■■□□□ 1.52
SNF8-216ENST00000573795 NCAPH2Q6IBW4 605 aa24.56■■□□□ 1.52
SNF8-216ENST00000573795 SMG8Q8ND04 991 aaKnown RBP24.56■■□□□ 1.52
SNF8-216ENST00000573795 XPNPEP1Q9NQW7 623 aa24.56■■□□□ 1.52
SNF8-216ENST00000573795 ASGR2P07307 311 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 MTMR3Q13615 1198 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 CTTNQ14247 550 aaKnown RBP24.55■■□□□ 1.52
SNF8-216ENST00000573795 FERMT3Q86UX7 667 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 EXOC8Q8IYI6 725 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 UBALD2Q8IYN6 164 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 ZDHHC14Q8IZN3 488 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 RNF149Q8NC42 400 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 URGCPQ8TCY9 931 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 TNFRSF25Q93038 417 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 PLXNA3P51805 1871 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 CNTNAP2Q9UHC6 1331 aa24.55■■□□□ 1.52
SNF8-216ENST00000573795 NCLP19338 710 aaKnown RBP24.54■■□□□ 1.52
SNF8-216ENST00000573795 CYP4A11Q02928 519 aa24.54■■□□□ 1.52
SNF8-216ENST00000573795 NR5A1Q13285 461 aa24.54■■□□□ 1.52
SNF8-216ENST00000573795 TMC5Q6UXY8 1006 aa24.54■■□□□ 1.52
SNF8-216ENST00000573795 TDRD5Q8NAT2 981 aaKnown RBP24.54■■□□□ 1.52
SNF8-216ENST00000573795 KLHL5Q96PQ7 755 aa24.54■■□□□ 1.52
SNF8-216ENST00000573795 TMEM175Q9BSA9 504 aa24.54■■□□□ 1.52
SNF8-216ENST00000573795 FAM86C1Q9NVL1 165 aa24.54■■□□□ 1.52
SNF8-216ENST00000573795 MARCH5Q9NX47 278 aa24.54■■□□□ 1.52
SNF8-216ENST00000573795 NRP1O14786 923 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 GAS2O43903 313 aaKnown RBP24.53■■□□□ 1.52
SNF8-216ENST00000573795 POMCP01189 267 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 SSBP05455 408 aaKnown RBP eCLIP24.53■■□□□ 1.52
SNF8-216ENST00000573795 CNPP09543 421 aaKnown RBP24.53■■□□□ 1.52
SNF8-216ENST00000573795 FDPSP14324 419 aaKnown RBP24.53■■□□□ 1.52
SNF8-216ENST00000573795 XBP1P17861 261 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 CLCN4P51793 760 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 XKR9Q5GH70 373 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 ATAT1Q5SQI0 421 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 CABP7Q86V35 215 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 TMEM87AQ8NBN3 555 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 TCP11Q8WWU5 503 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 NAP1L4Q99733 375 aaKnown RBP24.53■■□□□ 1.52
SNF8-216ENST00000573795 EIF2AQ9BY44 585 aaKnown RBP24.53■■□□□ 1.52
SNF8-216ENST00000573795 ZSWIM4Q9H7M6 989 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 DBR1Q9UK59 544 aaKnown RBP24.53■■□□□ 1.52
SNF8-216ENST00000573795 USTQ9Y2C2 406 aa24.53■■□□□ 1.52
SNF8-216ENST00000573795 TDRD15B5MCY1 1934 aaKnown RBP24.53■■□□□ 1.52
SNF8-216ENST00000573795 INPPL1O15357 1258 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 ASAP2O43150 1006 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 TSPAN1O60635 241 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 SLITRK3O94933 977 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 EFEMP2O95967 443 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 OTUD6AQ7L8S5 288 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 GPR149Q86SP6 731 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 PPFIBP1Q86W92 1011 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 MTRQ99707 1265 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 RNF39Q9H2S5 420 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 SFXN1Q9H9B4 322 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 ORC3Q9UBD5 711 aaPredicted RBP24.52■■□□□ 1.52
SNF8-216ENST00000573795 LIMD1Q9UGP4 676 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 FAN1Q9Y2M0 1017 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 IPPQ9Y573 584 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 CFAP54Q96N23 3096 aa24.52■■□□□ 1.52
SNF8-216ENST00000573795 PTENP60484 403 aa24.51■■□□□ 1.51
SNF8-216ENST00000573795 AMHR2Q16671 573 aa24.51■■□□□ 1.51
SNF8-216ENST00000573795 IFNLR1Q8IU57 520 aaPredicted RBP24.51■■□□□ 1.51
SNF8-216ENST00000573795 COLGALT2Q8IYK4 626 aa24.51■■□□□ 1.51
SNF8-216ENST00000573795 SLFN12Q8IYM2 578 aa24.51■■□□□ 1.51
SNF8-216ENST00000573795 RNF168Q8IYW5 571 aaPredicted RBP24.51■■□□□ 1.51
SNF8-216ENST00000573795 KANSL3Q9P2N6 904 aa24.51■■□□□ 1.51
SNF8-216ENST00000573795 WNT7AO00755 349 aa24.5■■□□□ 1.51
SNF8-216ENST00000573795 ALDH2P05091 517 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms