RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ZRSR1Q15695 479 aaKnown RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 IL17AQ16552 155 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 NAALADL2Q58DX5 795 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 CLLU1OSQ5K130 101 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 HYIQ5T013 277 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 KSR1Q8IVT5 923 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 ABI1Q8IZP0 508 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 HELQQ8TDG4 1101 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 CEP170P1Q96L14 293 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 NACC1Q96RE7 527 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 GCOM2Q9BZD3 368 aaPredicted RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 TMEM117Q9H0C3 514 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 CWH43Q9H720 699 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 ELAC1Q9H777 363 aaKnown RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 CYP26B1Q9NR63 512 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 TYW1Q9NV66 732 aaKnown RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 SUCLA2Q9P2R7 463 aaPredicted RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 DNM3Q9UQ16 869 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 PIN4Q9Y237 131 aaKnown RBP13.12□□□□□ -0.31
NDE1-206ENST00000572967 PCDHB12Q9Y5F1 795 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 TTC28Q96AY4 2481 aa13.12□□□□□ -0.31
NDE1-206ENST00000572967 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 HOXA2O43364 376 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 MAFO75444 373 aaPredicted RBP13.11□□□□□ -0.31
NDE1-206ENST00000572967 FGF18O76093 207 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
NDE1-206ENST00000572967 COL9A1P20849 921 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 LTBRP36941 435 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 DNM2P50570 870 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 GRIN1Q05586 938 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
NDE1-206ENST00000572967 EMC2Q15006 297 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 LONRF3Q496Y0 759 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 TWF2Q6IBS0 349 aaKnown RBP13.11□□□□□ -0.31
NDE1-206ENST00000572967 ZNF410Q86VK4 478 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 TPH2Q8IWU9 490 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 C4orf19Q8IY42 314 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 EXOC8Q8IYI6 725 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 SLC7A3Q8WY07 619 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 PPP2R3CQ969Q6 453 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 EPSTI1Q96J88 318 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 CASD1Q96PB1 797 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 HSD17B14Q9BPX1 270 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 EPHX3Q9H6B9 360 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 TLR9Q9NR96 1032 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 BARX2Q9UMQ3 279 aaPredicted RBP13.11□□□□□ -0.31
NDE1-206ENST00000572967 HPSEQ9Y251 543 aa13.11□□□□□ -0.31
NDE1-206ENST00000572967 TDRD15B5MCY1 1934 aaKnown RBP13.1□□□□□ -0.31
NDE1-206ENST00000572967 A0A1B0GVL5 298 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 FAM86C2PA6NEL3 165 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 PP2D1A8MPX8 630 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 MYL1P05976 194 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 PLCG1P19174 1290 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 YWHABP31946 246 aaKnown RBP13.1□□□□□ -0.31
NDE1-206ENST00000572967 NDUFA8P51970 172 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 KARSQ15046 597 aaKnown RBP13.1□□□□□ -0.31
NDE1-206ENST00000572967 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 PUS10Q3MIT2 529 aaKnown RBP13.1□□□□□ -0.31
NDE1-206ENST00000572967 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 TMEM119Q4V9L6 283 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 LRRC55Q6ZSA7 311 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 CNNM3Q8NE01 707 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 LPPQ93052 612 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 TMEM143Q96AN5 459 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 DHX58Q96C10 678 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 JPH2Q9BR39 696 aaPredicted RBP13.1□□□□□ -0.31
NDE1-206ENST00000572967 ENTPD7Q9NQZ7 604 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 DACT1Q9NYF0 836 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 KCND2Q9NZV8 630 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 KIAA1024Q9UPX6 916 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 COL4A3BPQ9Y5P4 624 aa13.1□□□□□ -0.31
NDE1-206ENST00000572967 MUC3AQ02505 3323 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 ARHGEF35A5YM69 484 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 ZBTB39O15060 712 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 POLR2DO15514 142 aaKnown RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 MBTPS2O43462 519 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 GADD45BO75293 160 aaPredicted RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 MED24O75448 989 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 GLP2RO95838 553 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 SLFN14P0C7P3 912 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 FAM189BP81408 668 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 SMAD4Q13485 552 aaKnown RBP13.09□□□□□ -0.31
NDE1-206ENST00000572967 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 KLHL40Q2TBA0 621 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 XKR9Q5GH70 373 aa13.09□□□□□ -0.31
NDE1-206ENST00000572967 CATSPER3Q86XQ3 398 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms