RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 SKIP12755 728 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 GLRA2P23416 452 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 PLA2G5P39877 138 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 KANK3Q6NY19 840 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 GLB1LQ6UWU2 654 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 EXOC8Q8IYI6 725 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 VPS52Q8N1B4 723 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 MTRQ99707 1265 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 PHF7Q9BWX1 381 aaPredicted RBP20.19■□□□□ 0.82
CHD3-214ENST00000572579 ZBP1Q9H171 429 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 ANKEF1Q9NU02 776 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 HCFC2Q9Y5Z7 792 aa20.19■□□□□ 0.82
CHD3-214ENST00000572579 ASAP2O43150 1006 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 MCM7P33993 719 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 RAB27AP51159 221 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 MBTD1Q05BQ5 628 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 CAPSQ13938 189 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 SMC1AQ14683 1233 aaKnown RBP20.18■□□□□ 0.82
CHD3-214ENST00000572579 C8orf34Q49A92 452 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 DDX53Q86TM3 631 aaKnown RBP20.18■□□□□ 0.82
CHD3-214ENST00000572579 CATSPER3Q86XQ3 398 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 IFNLR1Q8IU57 520 aaPredicted RBP20.18■□□□□ 0.82
CHD3-214ENST00000572579 TCP11Q8WWU5 503 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 CPB2Q96IY4 423 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 RPGRIP1Q96KN7 1286 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 POP1Q99575 1024 aaKnown RBP20.18■□□□□ 0.82
CHD3-214ENST00000572579 GPRC5CQ9NQ84 441 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 MIOSQ9NXC5 875 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 HES2Q9Y543 173 aa20.18■□□□□ 0.82
CHD3-214ENST00000572579 GAS2O43903 313 aaKnown RBP20.17■□□□□ 0.82
CHD3-214ENST00000572579 MED24O75448 989 aa20.17■□□□□ 0.82
CHD3-214ENST00000572579 NCLP19338 710 aaKnown RBP20.17■□□□□ 0.82
CHD3-214ENST00000572579 ZNF174Q15697 407 aa20.17■□□□□ 0.82
CHD3-214ENST00000572579 HFE2Q6ZVN8 426 aa20.17■□□□□ 0.82
CHD3-214ENST00000572579 C4orf32Q8N8J7 132 aa20.17■□□□□ 0.82
CHD3-214ENST00000572579 GBP3Q9H0R5 595 aa20.17■□□□□ 0.82
CHD3-214ENST00000572579 B4GALT5O43286 388 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 DGAT1O75907 488 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 POMCP01189 267 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 CTSAP10619 480 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 POU5F1BQ06416 359 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 C12orf76Q8N812 135 aaPredicted RBP20.16■□□□□ 0.82
CHD3-214ENST00000572579 SLC22A17Q8WUG5 538 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 PGBD4Q96DM1 585 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 TMEM169Q96HH4 297 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 RSAD1Q9HA92 442 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 ARIH1Q9Y4X5 557 aaPredicted RBP20.16■□□□□ 0.82
CHD3-214ENST00000572579 IPPQ9Y573 584 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 TECTAO75443 2155 aa20.16■□□□□ 0.82
CHD3-214ENST00000572579 LILRB3O75022 631 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 ARF4P18085 180 aaPredicted RBP20.15■□□□□ 0.82
CHD3-214ENST00000572579 TRIM29Q14134 588 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 MXD4Q14582 209 aaPredicted RBP20.15■□□□□ 0.82
CHD3-214ENST00000572579 NBR1Q14596 966 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 ECM1Q16610 540 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 TAS1R1Q7RTX1 841 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 GSTCDQ8NEC7 633 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 FBXO18Q8NFZ0 1043 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 EDAQ92838 391 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 C8orf76Q96K31 380 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 LLPHQ9BRT6 129 aaKnown RBP20.15■□□□□ 0.82
CHD3-214ENST00000572579 MARCH5Q9NX47 278 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 IRAK3Q9Y616 596 aa20.15■□□□□ 0.82
CHD3-214ENST00000572579 TTLL13PA6NNM8 815 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 F8W810 466 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 INO80B-WBP1J3KQ70 363 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 INPPL1O15357 1258 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 EFEMP2O95967 443 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 WEE2P0C1S8 567 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 XRCC6P12956 609 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHD3-214ENST00000572579 EPCAMP16422 314 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 RNASELQ05823 741 aaKnown RBP20.14■□□□□ 0.81
CHD3-214ENST00000572579 MAEAQ7L5Y9 396 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 CDR2LQ86X02 465 aaPredicted RBP20.14■□□□□ 0.81
CHD3-214ENST00000572579 COLGALT2Q8IYK4 626 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 RSPH1Q8WYR4 309 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 FAM122AQ96E09 287 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 ZFP42Q96MM3 310 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 GAD1Q99259 594 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 CSRNP2Q9H175 543 aa20.14■□□□□ 0.81
CHD3-214ENST00000572579 POLR3FQ9H1D9 316 aaPredicted RBP20.14■□□□□ 0.81
CHD3-214ENST00000572579 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.13■□□□□ 0.81
CHD3-214ENST00000572579 FSD2A1L4K1 749 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 ARL5CA6NH57 179 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 NRP1O14786 923 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 USO1O60763 962 aaKnown RBP20.13■□□□□ 0.81
CHD3-214ENST00000572579 HOXB8P17481 243 aaPredicted RBP20.13■□□□□ 0.81
CHD3-214ENST00000572579 TOB1P50616 345 aaPredicted RBP20.13■□□□□ 0.81
CHD3-214ENST00000572579 PTPN14Q15678 1187 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 POTEGQ6S5H5 508 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 BSNDQ8WZ55 320 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 POLR3CQ9BUI4 534 aaPredicted RBP20.13■□□□□ 0.81
CHD3-214ENST00000572579 NFKBIZQ9BYH8 718 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 ADAM7Q9H2U9 754 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 FOXP1Q9H334 677 aaPredicted RBP20.13■□□□□ 0.81
CHD3-214ENST00000572579 HCN4Q9Y3Q4 1203 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 MUC6Q6W4X9 2439 aa20.13■□□□□ 0.81
CHD3-214ENST00000572579 ITGA4P13612 1032 aa20.12■□□□□ 0.81
CHD3-214ENST00000572579 SP100P23497 879 aaPredicted RBP20.12■□□□□ 0.81
CHD3-214ENST00000572579 AXLP30530 894 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms