RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CUL5Q93034 780 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 COL26A1Q96A83 441 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 CLDN23Q96B33 292 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 LENG9Q96B70 501 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 RRP36Q96EU6 259 aaKnown RBP8.18□□□□□ -1.1
SMG6-205ENST00000570659 CDHR1Q96JP9 859 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 RPS6KC1Q96S38 1066 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 LRRC2Q9BYS8 371 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 ANO3Q9BYT9 981 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 GPR62Q9BZJ7 368 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 MINDY3Q9H8M7 445 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 SEMA4GQ9NTN9 838 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 GABBR1Q9UBS5 961 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 ZMIZ1Q9ULJ6 1067 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 WASF3Q9UPY6 502 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 VWA8A3KMH1 1905 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 F5P12259 2224 aa8.18□□□□□ -1.1
SMG6-205ENST00000570659 TICRRQ7Z2Z1 1910 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 A0A087WZ62 844 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 SPDYE4A6NLX3 237 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 PRR5-ARHGAP8B1AHC4 643 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 RPLP2P05387 115 aaKnown RBP8.17□□□□□ -1.1
SMG6-205ENST00000570659 CLK2P49760 499 aaKnown RBP8.17□□□□□ -1.1
SMG6-205ENST00000570659 ARHGAP8P85298 464 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 SATB1Q01826 763 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 FUT2Q10981 343 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 ACAP1Q15027 740 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 TARBP2Q15633 366 aaKnown RBP8.17□□□□□ -1.1
SMG6-205ENST00000570659 B4GALNT3Q6L9W6 998 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 PRR23CQ6ZRP0 262 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 TPRG1Q6ZUI0 275 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 HEATR3Q7Z4Q2 680 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 COLGALT2Q8IYK4 626 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
SMG6-205ENST00000570659 SMG8Q8ND04 991 aaKnown RBP8.17□□□□□ -1.1
SMG6-205ENST00000570659 ATRIPQ8WXE1 791 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 FGF13Q92913 245 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 SDF4Q9BRK5 362 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 PAAF1Q9BRP4 392 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 FDXACB1Q9BRP7 624 aaPredicted RBP8.17□□□□□ -1.1
SMG6-205ENST00000570659 HERC2P3Q9BVR0 1158 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 RXFP1Q9HBX9 757 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 HEBP1Q9NRV9 189 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 FAM105AQ9NUU6 356 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 CNTNAP5Q8WYK1 1306 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 EML5Q05BV3 1969 aa8.17□□□□□ -1.1
SMG6-205ENST00000570659 SOD2P04179 222 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 GSPT1P15170 499 aaKnown RBP8.16□□□□□ -1.1
SMG6-205ENST00000570659 ZSCAN20P17040 1043 aaPredicted RBP8.16□□□□□ -1.1
SMG6-205ENST00000570659 FCARP24071 287 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 HOXA11P31270 313 aaPredicted RBP8.16□□□□□ -1.1
SMG6-205ENST00000570659 SREBF1P36956 1147 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 SHC2P98077 582 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 SLC5A9Q2M3M2 681 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 GREB1Q4ZG55 1949 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 PPFIBP1Q86W92 1011 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 PLA2G4DQ86XP0 818 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 CKAP2LQ8IYA6 745 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 NETO1Q8TDF5 533 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 ZFP42Q96MM3 310 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 SMG1Q96Q15 3661 aaKnown RBP8.16□□□□□ -1.1
SMG6-205ENST00000570659 MRPL9Q9BYD2 267 aaKnown RBP8.16□□□□□ -1.1
SMG6-205ENST00000570659 BCO2Q9BYV7 579 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 RHOBTB2Q9BYZ6 727 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 CNNM2Q9H8M5 875 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 FAM217BQ9NTX9 383 aaPredicted RBP8.16□□□□□ -1.1
SMG6-205ENST00000570659 POLR3BQ9NW08 1133 aaPredicted RBP8.16□□□□□ -1.1
SMG6-205ENST00000570659 ANGPTL2Q9UKU9 493 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 PIN4Q9Y237 131 aaKnown RBP8.16□□□□□ -1.1
SMG6-205ENST00000570659 HES2Q9Y543 173 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 PCDHB2Q9Y5E7 798 aa8.16□□□□□ -1.1
SMG6-205ENST00000570659 TDRD15B5MCY1 1934 aaKnown RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 BPTFQ12830 3046 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 SPDYE3A6NKU9 549 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 CHURC1-FNTBB4DL54 471 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 IPO5O00410 1097 aaKnown RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 SH2B2O14492 632 aaPredicted RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 CCL16O15467 120 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 MAFGO15525 162 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 GLUD1P00367 558 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 IGHDP01880 384 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 PROS1P07225 676 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 FSHRP23945 695 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 KIF5BP33176 963 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 FNTBP49356 437 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 SLC26A2P50443 739 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 PRKCEQ02156 737 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 DSG1Q02413 1049 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 DSC1Q08554 894 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 RTP2Q5QGT7 225 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 JAKMIP3Q5VZ66 844 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 FAM160B1Q5W0V3 765 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 TWF2Q6IBS0 349 aaKnown RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 TCEAL6Q6IPX3 200 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 RSPO2Q6UXX9 243 aaPredicted RBP8.15□□□□□ -1.1
SMG6-205ENST00000570659 PRR23BQ6ZRT6 265 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 TMTC3Q6ZXV5 915 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 NPAS3Q8IXF0 933 aa8.15□□□□□ -1.1
SMG6-205ENST00000570659 GSTCDQ8NEC7 633 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms