RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 MMP13P45452 471 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 COPS2P61201 443 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 FUT2Q10981 343 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 ASTE1Q2TB18 679 aaPredicted RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 MIIPQ5JXC2 388 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 OR52E8Q6IFG1 317 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 TTI2Q6NXR4 508 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 GADL1Q6ZQY3 521 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 TMTC3Q6ZXV5 915 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 APBB1IPQ7Z5R6 666 aaPredicted RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 DDX42Q86XP3 938 aaKnown RBP eCLIP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 LMNTD2Q8IXW0 634 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 GMCL1Q96IK5 515 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 MS4A4AQ96JQ5 239 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 NKX1-2Q9UD57 310 aaPredicted RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 A0A0G2JLL6 359 aaPredicted RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 BUB1O43683 1085 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 SF3A3Q12874 501 aaKnown RBP eCLIP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 PABPC1LQ4VXU2 614 aaKnown RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 EARS2Q5JPH6 523 aaKnown RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 CYP4F22Q6NT55 531 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 TMC3Q7Z5M5 1100 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 PRRT2Q7Z6L0 340 aaPredicted RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 DCAF4Q8WV16 495 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 SHISA4Q96DD7 197 aa15.2■□□□□ 0.02
GCOM1-213ENST00000569945 RPAP3Q9H6T3 665 aaPredicted RBP15.2■□□□□ 0.02
GCOM1-213ENST00000569945 FAM155AB1AL88 458 aaPredicted RBP15.19■□□□□ 0.02
GCOM1-213ENST00000569945 E7ENQ6 273 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 SNX3O60493 162 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 CALM1P0DP23 149 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 CALM2P0DP24 149 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 CALM3P0DP25 149 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 TAL1P17542 331 aaPredicted RBP15.19■□□□□ 0.02
GCOM1-213ENST00000569945 APLP1P51693 650 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 ATP11AP98196 1134 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 KLHL7Q8IXQ5 586 aa15.19■□□□□ 0.02
GCOM1-213ENST00000569945 ZMYND8Q9ULU4 1186 aaPredicted RBP15.19■□□□□ 0.02
GCOM1-213ENST00000569945 UNCXA6NJT0 531 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 C19orf81C9J6K1 198 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 PEX10O60683 326 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 SHBGP04278 402 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 DYNC1I2Q13409 638 aaKnown RBP15.18■□□□□ 0.02
GCOM1-213ENST00000569945 MEI1Q5TIA1 1274 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 RNF220Q5VTB9 566 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 FOXB2Q5VYV0 432 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 KIFAP3Q92845 792 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 RPS6KC1Q96S38 1066 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 DUSP9Q99956 384 aaKnown RBP15.18■□□□□ 0.02
GCOM1-213ENST00000569945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.18■□□□□ 0.02
GCOM1-213ENST00000569945 MAGEC2Q9UBF1 373 aaPredicted RBP15.18■□□□□ 0.02
GCOM1-213ENST00000569945 PHF24Q9UPV7 400 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 CXCL11O14625 94 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 AKR1B10O60218 316 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 DEXIO95424 95 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 PHC3Q8NDX5 983 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 SCFD2Q8WU76 684 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 BRI3BPQ8WY22 251 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 IQCDQ96DY2 449 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 C12orf42Q96LP6 360 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 TRAPPC9Q96Q05 1148 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 ZNF232Q9UNY5 417 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 STK38LQ9Y2H1 464 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 CNTNAP5Q8WYK1 1306 aa15.18■□□□□ 0.02
GCOM1-213ENST00000569945 EPHB6O15197 1021 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 PALMO75781 387 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 RCAN1P53805 252 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 KLC1Q07866 573 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 MYBPC3Q14896 1274 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 ASPRV1Q53RT3 343 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 GPAT2Q6NUI2 795 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 TMEM154Q6P9G4 183 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 TRIM22Q8IYM9 498 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 GBP7Q8N8V2 638 aaPredicted RBP15.17■□□□□ 0.02
GCOM1-213ENST00000569945 MAIP1Q8WWC4 291 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 TRIM47Q96LD4 638 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 PTPN18Q99952 460 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 TXLNGYQ9BZA5 131 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 DNAAF2Q9NVR5 837 aaKnown RBP15.17■□□□□ 0.02
GCOM1-213ENST00000569945 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 SYNPO2Q9UMS6 1093 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 MYH6P13533 1939 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 HIP1RO75146 1068 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 BMP15O95972 392 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 PDHA1P08559 390 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 SLC10A3P09131 477 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 ACADSP16219 412 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 CALB2P22676 271 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 IKQ13123 557 aaPredicted RBP15.17■□□□□ 0.02
GCOM1-213ENST00000569945 SNAPC2Q13487 334 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 POTEEQ6S8J3 1075 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 ADGRF4Q8IZF3 695 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 FAM136AQ96C01 138 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 IFT74Q96LB3 600 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 SUDS3Q9H7L9 328 aaPredicted RBP15.17■□□□□ 0.02
GCOM1-213ENST00000569945 ZWILCHQ9H900 591 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 RNPEPL1Q9HAU8 725 aa15.17■□□□□ 0.02
GCOM1-213ENST00000569945 CTNNAL1Q9UBT7 734 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms