RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 NSUN4Q96CB9 384 aaKnown RBP7.23□□□□□ -1.25
UBFD1-209ENST00000569919 EXOC2Q96KP1 924 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 LRFN3Q9BTN0 628 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 GPR62Q9BZJ7 368 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 PRDM12Q9H4Q4 367 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 HOXC10Q9NYD6 342 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 RAI14Q9P0K7 980 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 NRBP1Q9UHY1 535 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 MSRAQ9UJ68 235 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 SF3B6Q9Y3B4 125 aaKnown RBP7.23□□□□□ -1.25
UBFD1-209ENST00000569919 PTPRCP08575 1304 aa7.23□□□□□ -1.25
UBFD1-209ENST00000569919 PRUNE2Q8WUY3 3088 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 PPP1R12AO14974 1030 aaPredicted RBP7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ASMTLO95671 621 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ITIH2P19823 946 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ADORA2AP29274 412 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ADORA1P30542 326 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 PPIGQ13427 754 aaKnown RBP eCLIP7.22□□□□□ -1.256e-9■□□□□ 9.8
UBFD1-209ENST00000569919 COG2Q14746 738 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 TCEA2Q15560 299 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 RAB30Q15771 203 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 TKFCQ3LXA3 575 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 TMEM31Q5JXX7 168 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 NKAPLQ5M9Q1 402 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 PRAMEF19Q5SWL8 479 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 CDKAL1Q5VV42 579 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 MFSD5Q6N075 450 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ANKRD33Q7Z3H0 272 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ABRAQ8N0Z2 381 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 SHCBP1Q8NEM2 672 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
UBFD1-209ENST00000569919 SH3RF3Q8TEJ3 882 aaPredicted RBP7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ZNF384Q8TF68 577 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 NUP133Q8WUM0 1156 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 BTN2A2Q8WVV5 523 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 IPO9Q96P70 1041 aaKnown RBP7.22□□□□□ -1.25
UBFD1-209ENST00000569919 FEZ1Q99689 392 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 DHRS4Q9BTZ2 278 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 HDAC8Q9BY41 377 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 KIAA1683Q9H0B3 1180 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 DUSP15Q9H1R2 295 aaPredicted RBP7.22□□□□□ -1.25
UBFD1-209ENST00000569919 SLC28A3Q9HAS3 691 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 MKNK2Q9HBH9 465 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 LRRC4CQ9HCJ2 640 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 BTBD7Q9P203 1132 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ZBTB21Q9ULJ3 1066 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 ST14Q9Y5Y6 855 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 DNAH12Q6ZR08 3092 aa7.22□□□□□ -1.25
UBFD1-209ENST00000569919 LAMA2P24043 3122 aaKnown RBP7.21□□□□□ -1.25
UBFD1-209ENST00000569919 TRBV23-1A0A0A0MS06 115 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 CCDC163A0A0D9SF12 145 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 H0Y8X5 98 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 PRODHO43272 600 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 PQBP1O60828 265 aaKnown RBP7.21□□□□□ -1.26
UBFD1-209ENST00000569919 HLA-DOAP06340 250 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 RARBP10826 455 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 FGFR1P11362 822 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 SRFP11831 508 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 CTSKP43235 329 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 GRB10Q13322 594 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 RSPO4Q2I0M5 234 aaPredicted RBP7.21□□□□□ -1.26
UBFD1-209ENST00000569919 FAM47AQ5JRC9 791 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 TMEM240Q5SV17 173 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 GORABQ5T7V8 394 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 GTF2IRD2BQ6EKJ0 949 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 NSMFQ6X4W1 530 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 GTF2IRD2Q86UP8 949 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 SCUBE1Q8IWY4 988 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 SYNPOQ8N3V7 929 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 TMEM199Q8N511 208 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 SPATA5Q8NB90 893 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 DAGLBQ8NCG7 672 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 TGFBRAP1Q8WUH2 860 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 HERVK_113Q902F9 699 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 KISS1RQ969F8 398 aaPredicted RBP7.21□□□□□ -1.26
UBFD1-209ENST00000569919 IER2Q9BTL4 223 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 MOV10L1Q9BXT6 1211 aaKnown RBP7.21□□□□□ -1.26
UBFD1-209ENST00000569919 MROH8Q9H579 483 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 EPHX3Q9H6B9 360 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 CABP5Q9NP86 173 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 XPNPEP3Q9NQH7 507 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 HMG20BQ9P0W2 317 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 PALD1Q9ULE6 856 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 FRMPD3Q5JV73 1810 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 ATAD5Q96QE3 1844 aa7.21□□□□□ -1.26
UBFD1-209ENST00000569919 A0A1B0GUL7 405 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 A0A1W2PQ45 241 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 A0A1W2PQY0 241 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 COBLO75128 1261 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 GH2P01242 217 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 PROCP04070 461 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 CEACAM5P06731 702 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 UBTFL1P0CB47 393 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 PABPC1P11940 636 aaKnown RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 FCER1AP12319 257 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 GYS2P54840 703 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 AMPD2Q01433 879 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 SF1Q15637 639 aaKnown RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 CPSF6Q16630 551 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 DPY19L1Q2PZI1 675 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms