RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 MRPL38Q96DV4 380 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 CPB2Q96IY4 423 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 RUSC1Q9BVN2 902 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 LMAN2LQ9H0V9 348 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 CSRNP2Q9H175 543 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 FZD8Q9H461 694 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 CWH43Q9H720 699 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 KCND2Q9NZV8 630 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 FBXO2Q9UK22 296 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 PCDHB12Q9Y5F1 795 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 REV3LO60673 3130 aa15.27■□□□□ 0.03
HERPUD1-218ENST00000569569 A0A1B0GUA9 196 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 HIP1RO75146 1068 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 F13A1P00488 732 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 GUCY2CP25092 1073 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 NASPP49321 788 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 SLC12A3P55017 1021 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 KARSQ15046 597 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 MAPK6Q16659 721 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 CSPP1Q1MSJ5 1256 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 LRRC55Q6ZSA7 311 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 LRRC43Q8N309 656 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 KLHL23Q8NBE8 558 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 RASSF8Q8NHQ8 419 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 DRC1Q96MC2 740 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 MRPL9Q9BYD2 267 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 C17orf75Q9HAS0 396 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 KCNG1Q9UIX4 513 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 PLAGL2Q9UPG8 496 aa15.26■□□□□ 0.03
HERPUD1-218ENST00000569569 CCDC169A6NNP5 214 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 MEIS3P2A8K0S8 358 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 ACKR2O00590 384 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 GRM6O15303 877 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 B4GALT5O43286 388 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 OFD1O75665 1012 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 LAG3P18627 525 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 NCLP19338 710 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 EFNA5P52803 228 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 PEX3P56589 373 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 STK38Q15208 465 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 LONRF3Q496Y0 759 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 SPECC1Q5M775 1068 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 FOXD4L5Q5VV16 416 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 SLC27A1Q6PCB7 646 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 GLB1LQ6UWU2 654 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 AGMOQ6ZNB7 445 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 DAW1Q8N136 415 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 KRI1Q8N9T8 703 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 COLGALT1Q8NBJ5 622 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 LINC00301Q8NCQ3 95 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 FOXD4L4Q8WXT5 416 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 EPSTI1Q96J88 318 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 CLIC6Q96NY7 704 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 EIF2AQ9BY44 585 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 TRIM6Q9C030 488 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 ALG13Q9NP73 1137 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 UBN1Q9NPG3 1134 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 TFIP11Q9UBB9 837 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 CCDC39Q9UFE4 941 aa15.25■□□□□ 0.03
HERPUD1-218ENST00000569569 CNTNAP2Q9UHC6 1331 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 K7ERI5 159 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 SPTLC2O15270 562 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 ITGB1P05556 798 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 PRKCBP05771 671 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 ITGA4P13612 1032 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 PLCG1P19174 1290 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 DDIT3P35638 169 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 TXLNAP40222 546 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 NPTX2P47972 431 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 MAPK7Q13164 816 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 DMP1Q13316 513 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 PRPF4BQ13523 1007 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 SKIV2LQ15477 1246 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 NOMO2Q5JPE7 1267 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 USP49Q70CQ1 688 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 SMG8Q8ND04 991 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 SPPL3Q8TCT6 385 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 SYMPKQ92797 1274 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 NTPCRQ9BSD7 190 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 RSAD1Q9HA92 442 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 BLOC1S4Q9NUP1 217 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 HCSTQ9UBK5 93 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 DAXXQ9UER7 740 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 IPPQ9Y573 584 aa15.24■□□□□ 0.03
HERPUD1-218ENST00000569569 UNC80Q8N2C7 3258 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 PHLPP2Q6ZVD8 1323 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 CITO14578 2027 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 SFI1A8K8P3 1242 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 N4BP3O15049 544 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 PPP6R2O75170 966 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 YEATS4O95619 227 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 LIG1P18858 919 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 UBE3AQ05086 875 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 RAD51AP2Q09MP3 1159 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 PKP1Q13835 747 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 BECN1Q14457 450 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 DHX8Q14562 1220 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms