RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 CEP89Q96ST8 783 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 LXNQ9BS40 222 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 TMEM109Q9BVC6 243 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 PLVAPQ9BX97 442 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 TXLNGYQ9BZA5 131 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 GPR88Q9GZN0 384 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 NEUROG2Q9H2A3 272 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 CENPHQ9H3R5 247 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 GOLPH3Q9H4A6 298 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 SEPT11Q9NVA2 429 aaKnown RBP8.65□□□□□ -1.02
SPG7-220ENST00000569363 MAP3K20Q9NYL2 800 aaKnown RBP8.65□□□□□ -1.02
SPG7-220ENST00000569363 BCCIPQ9P287 314 aaKnown RBP eCLIP8.65□□□□□ -1.02
SPG7-220ENST00000569363 CTTNBP2NLQ9P2B4 639 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 SLC12A6Q9UHW9 1150 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 CNOT7Q9UIV1 285 aaKnown RBP8.65□□□□□ -1.02
SPG7-220ENST00000569363 PPP1R9AQ9ULJ8 1098 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 EXOC7Q9UPT5 735 aa8.65□□□□□ -1.02
SPG7-220ENST00000569363 ZNF536O15090 1300 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 COL11A2P13942 1736 aaPredicted RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 A0A1W2PRG0 241 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 K7ENM7 598 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 FOXN3O00409 490 aaPredicted RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 IPO5O00410 1097 aaKnown RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 TBC1D12O60347 775 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 TRIM49P0CI25 452 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 TRIM49CP0CI26 452 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 ITGA4P13612 1032 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 PLS3P13797 630 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 VCAM1P19320 739 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 ABCB4P21439 1286 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 MAN1A1P33908 653 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 PMS2P54278 862 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 MFAP3P55082 362 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 ADCY2Q08462 1091 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 MAPK7Q13164 816 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 COG2Q14746 738 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 SHROOM1Q2M3G4 852 aaPredicted RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 EPC2Q52LR7 807 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 KIAA1755Q5JYT7 1200 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 DENND2CQ68D51 928 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 PHLDB3Q6NSJ2 640 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 CCDC174Q6PII3 467 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 USP37Q86T82 979 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 DDX42Q86XP3 938 aaKnown RBP eCLIP8.64□□□□□ -1.03
SPG7-220ENST00000569363 COL23A1Q86Y22 540 aaPredicted RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 JAMLQ86YT9 394 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 PRPF38AQ8NAV1 312 aaKnown RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 LMO3Q8TAP4 145 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 ATP8B4Q8TF62 1192 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 FAM151AQ8WW52 585 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 KIFAP3Q92845 792 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 CNKSR1Q969H4 720 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 TLCD1Q96CP7 247 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 CYFIP2Q96F07 1278 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 PGM2Q96G03 612 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 ZSWIM1Q9BR11 485 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 THAP2Q9H0W7 228 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 DPH5Q9H2P9 285 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 PABPC3Q9H361 631 aaKnown RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 TDRD3Q9H7E2 651 aaKnown RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 VCPKMTQ9H867 229 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 UBE2TQ9NPD8 197 aaPredicted RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 OSGEPQ9NPF4 335 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 PCYOX1Q9UHG3 505 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 ZBTB21Q9ULJ3 1066 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 NOVA2Q9UNW9 492 aaKnown RBP8.64□□□□□ -1.03
SPG7-220ENST00000569363 ALG6Q9Y672 507 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 CAPN7Q9Y6W3 813 aa8.64□□□□□ -1.03
SPG7-220ENST00000569363 EMSYQ7Z589 1322 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 RPTORQ8N122 1335 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 ANKRD65E5RJM6 399 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 AGTP01019 485 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 FTLP02792 175 aaPredicted RBP8.63□□□□□ -1.03
SPG7-220ENST00000569363 MMP10P09238 476 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 ARP10275 920 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 GHRP10912 638 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 ALAS1P13196 640 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 GTF2H1P32780 548 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 ABCD1P33897 745 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 PTGIRP43119 386 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 FNTAP49354 379 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 HSD17B4P51659 736 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 GTF2A1P52655 376 aaPredicted RBP8.63□□□□□ -1.03
SPG7-220ENST00000569363 MAGOHP61326 146 aaKnown RBP8.63□□□□□ -1.03
SPG7-220ENST00000569363 GTF2BQ00403 316 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 GHRHRQ02643 423 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 ACTN3Q08043 901 aaPredicted RBP8.63□□□□□ -1.03
SPG7-220ENST00000569363 CYP1B1Q16678 543 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 SWT1Q5T5J6 900 aaKnown RBP8.63□□□□□ -1.03
SPG7-220ENST00000569363 RNF187Q5TA31 235 aaPredicted RBP8.63□□□□□ -1.03
SPG7-220ENST00000569363 GKAP1Q5VSY0 366 aaPredicted RBP8.63□□□□□ -1.03
SPG7-220ENST00000569363 FKBP1CQ5VVH2 108 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 C6orf89Q6UWU4 347 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 SYDE1Q6ZW31 735 aaPredicted RBP8.63□□□□□ -1.03
SPG7-220ENST00000569363 CYFIP1Q7L576 1253 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 KRT27Q7Z3Y8 459 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 DEFB132Q7Z7B7 95 aa8.63□□□□□ -1.03
SPG7-220ENST00000569363 CCDC50Q8IVM0 306 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms