RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 STAMQ92783 540 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 SMOC2Q9H3U7 446 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 COL4A3BPQ9Y5P4 624 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 SNX14Q9Y5W7 946 aa17.64■□□□□ 0.41
HERPUD1-215ENST00000568676 ASAP2O43150 1006 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 LILRB3O75022 631 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 DEXIO95424 95 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 TDP2O95551 362 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 SOD2P04179 222 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 URODP06132 367 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 CNPP09543 421 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 PDIA3P30101 505 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 RFC5P40937 340 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 QARSP47897 775 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 SSRP1Q08945 709 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 PPP2R5CQ13362 524 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 CWF19L1Q69YN2 538 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 ERMP1Q7Z2K6 904 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 ZNF280BQ86YH2 543 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 BLIDQ8IZY5 108 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 FLCNQ8NFG4 579 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 PSPC1Q8WXF1 523 aaKnown RBP17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 NXPE3Q969Y0 559 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 FAM20AQ96MK3 541 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 VN1R3Q9BXE9 311 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 KCNK12Q9HB15 430 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 FBXL21Q9UKT6 434 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 CFAP54Q96N23 3096 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 MYO15AQ9UKN7 3530 aa17.63■□□□□ 0.41
HERPUD1-215ENST00000568676 MEIS3P2A8K0S8 358 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 P4HBP07237 508 aaKnown RBP17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 ADH1AP07327 375 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 LONRF3Q496Y0 759 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 KANK3Q6NY19 840 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 KRT25Q7Z3Z0 450 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 HDAC7Q8WUI4 952 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 TCP11Q8WWU5 503 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 GJA10Q969M2 543 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 SEMA4AQ9H3S1 761 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 DHX33Q9H6R0 707 aaKnown RBP17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 WNT16Q9UBV4 365 aa17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 DDX25Q9UHL0 483 aaKnown RBP17.62■□□□□ 0.41
HERPUD1-215ENST00000568676 TMEM150BA6NC51 233 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 M0R2N6 131 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 NRP1O14786 923 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 CPLX1O14810 134 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 NR1I2O75469 434 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 DDHD2O94830 711 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 GCFC2P16383 781 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 NCLP19338 710 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 AXLP30530 894 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 CPLX2Q6PUV4 134 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 OTUD6AQ7L8S5 288 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 FRMD5Q7Z6J6 570 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 KSR1Q8IVT5 923 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 GPR65Q8IYL9 337 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 CCDC51Q96ER9 411 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 CEP170P1Q96L14 293 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 RPS6KC1Q96S38 1066 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 NAP1L4Q99733 375 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 SH2D3AQ9BRG2 576 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 HERC2P3Q9BVR0 1158 aa17.61■□□□□ 0.41
HERPUD1-215ENST00000568676 INPPL1O15357 1258 aa17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 EPB41L2O43491 1005 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 REC8O95072 547 aa17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 PAPLNO95428 1278 aa17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 NPR3P17342 541 aa17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 CCT2P78371 535 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 NCBP1Q09161 790 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 PPP4R3AQ6IN85 833 aa17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 C4orf19Q8IY42 314 aa17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 PRPF31Q8WWY3 499 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 WDR6Q9NNW5 1121 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 MAN1C1Q9NR34 630 aa17.6■□□□□ 0.41
HERPUD1-215ENST00000568676 TBX3O15119 743 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 B4GALT3O60512 393 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 ERLIN2O94905 339 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 GLUD1P00367 558 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 SSBP05455 408 aaKnown RBP eCLIP17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 ITGA4P13612 1032 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 HOXA11P31270 313 aaPredicted RBP17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 AK2P54819 239 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 LAMTOR4Q0VGL1 99 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 ANGPT1Q15389 498 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 PLA2G4FQ68DD2 849 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 SIX5Q8N196 739 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 DTWD2Q8NBA8 298 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 ZNF274Q96GC6 653 aaPredicted RBP17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 SLKQ9H2G2 1235 aaPredicted RBP17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 PLEKHA4Q9H4M7 779 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 RXFP1Q9HBX9 757 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 NCOA5Q9HCD5 579 aaKnown RBP17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 KCNMB3Q9NPA1 279 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 EPS15L1Q9UBC2 864 aa17.59■□□□□ 0.41
HERPUD1-215ENST00000568676 PTPRZ1P23471 2315 aaPredicted RBP17.58■□□□□ 0.41
HERPUD1-215ENST00000568676 CLUHO75153 1309 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 CCDC195A0A1B0GUA6 201 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 POMCP01189 267 aa17.58■□□□□ 0.4
HERPUD1-215ENST00000568676 SRGAP2CP0DJJ0 459 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms