RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	SKI	P12755	728 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	CD44	P16070	742 aa	Known RBP	13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	AXL	P30530	894 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	UBA7	P41226	1012 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	TMEM119	Q4V9L6	283 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	SPECC1	Q5M775	1068 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	USP49	Q70CQ1	688 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	MRPL10	Q7Z7H8	261 aa	Known RBP	13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	SYT2	Q8N9I0	419 aa	Predicted RBP	13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	LINC00301	Q8NCQ3	95 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	SLC17A8	Q8NDX2	589 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	HELQ	Q8TDG4	1101 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	LRRC15	Q8TF66	581 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	LPP	Q93052	612 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	CCDC34	Q96HJ3	373 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	CPB2	Q96IY4	423 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	CLIC6	Q96NY7	704 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	PYM1	Q9BRP8	204 aa	Known RBP	13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	RUSC1	Q9BVN2	902 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	PLVAP	Q9BX97	442 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	TMEM117	Q9H0C3	514 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	CSRNP2	Q9H175	543 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	CWH43	Q9H720	699 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	PRDM6	Q9NQX0	595 aa		13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	SRPRB	Q9Y5M8	271 aa	Known RBP	13.6	□□□□□ -0.23
SCAPER-219	ENST00000568382	GRM6	O15303	877 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	B4GALT5	O43286	388 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	CUTA	O60888	179 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	HIP1R	O75146	1068 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	SSB	P05455	408 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	PLA2G4B	P0C869	781 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	ARF4	P18085	180 aa	Predicted RBP	13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	PTMS	P20962	102 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	NAMPT	P43490	491 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	RAB27A	P51159	221 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	SLC12A3	P55017	1021 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	NCBP1	Q09161	790 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	KARS	Q15046	597 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	ABI1	Q8IZP0	508 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	DAW1	Q8N136	415 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	KLHL23	Q8NBE8	558 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	RASSF8	Q8NHQ8	419 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	KIFAP3	Q92845	792 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	CALML4	Q96GE6	196 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	EPSTI1	Q96J88	318 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	CDK5RAP3	Q96JB5	506 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	EIF2A	Q9BY44	585 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	CCSER1	Q9C0I3	900 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	FZD8	Q9H461	694 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	FAM13B	Q9NYF5	915 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	PLAGL2	Q9UPG8	496 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	PLXNA4	Q9HCM2	1894 aa		13.59	□□□□□ -0.23
SCAPER-219	ENST00000568382	ATG2A	Q2TAZ0	1938 aa		13.58	□□□□□ -0.23
SCAPER-219	ENST00000568382	MYH11	P35749	1972 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382		A0A1B0GUA9	196 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	TTLL13P	A6NNM8	815 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	OFD1	O75665	1012 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	ITGB1	P05556	798 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	MAPK7	Q13164	816 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	PPP2R5A	Q15172	486 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	FAM187B	Q17R55	369 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	NAALADL2	Q58DX5	795 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	ARSH	Q5FYA8	562 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	SPOUT1	Q5T280	376 aa	Known RBP	13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	NOTUM	Q6P988	496 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	AGMO	Q6ZNB7	445 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	CDR2L	Q86X02	465 aa	Predicted RBP	13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	ZBTB8OS	Q8IWT0	167 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	SMG8	Q8ND04	991 aa	Known RBP	13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	DEPTOR	Q8TB45	409 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	LEO1	Q8WVC0	666 aa	Predicted RBP	13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	P2RX5	Q93086	422 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	PGBD4	Q96DM1	585 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	MRPL38	Q96DV4	380 aa	Known RBP	13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	IFT74	Q96LB3	600 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	KIFC3	Q9BVG8	833 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	CCDC113	Q9H0I3	377 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	C2orf40	Q9H1Z8	148 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	ALG13	Q9NP73	1137 aa	Known RBP	13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	BLOC1S4	Q9NUP1	217 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	CCDC39	Q9UFE4	941 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	USP20	Q9Y2K6	914 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	TRANK1	O15050	2925 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	EYS	Q5T1H1	3165 aa		13.58	□□□□□ -0.24
SCAPER-219	ENST00000568382	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	SFI1	A8K8P3	1242 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	EDN1	P05305	212 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	PLCG1	P19174	1290 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	GUCY2C	P25092	1073 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	DNAJB1	P25685	340 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	NPTX2	P47972	431 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	PEX3	P56589	373 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	RAD51AP2	Q09MP3	1159 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	CAMK1	Q14012	370 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	MAPK6	Q16659	721 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	PTPRO	Q16827	1216 aa		13.57	□□□□□ -0.24
SCAPER-219	ENST00000568382	CLEC17A	Q6ZS10	378 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms