RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 ALDH2P05091 517 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 DARSP14868 501 aaKnown RBP10.86□□□□□ -0.67
KARS-209ENST00000568378 GLUD2P49448 558 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 CEP68Q76N32 757 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 ZNF280BQ86YH2 543 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 ZNF710Q8N1W2 664 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 RRP36Q96EU6 259 aaKnown RBP10.86□□□□□ -0.67
KARS-209ENST00000568378 KIF12Q96FN5 646 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 IER2Q9BTL4 223 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 HERC2P3Q9BVR0 1158 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 CHRDQ9H2X0 955 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 PSTPIP2Q9H939 334 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 CEP131Q9UPN4 1083 aa10.86□□□□□ -0.67
KARS-209ENST00000568378 IGKV6D-21A0A0A0MT36 114 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 CHURC1-FNTBB4DL54 471 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 TAF4O00268 1085 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 MAGEB2O15479 319 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 HRO43593 1189 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 B4GALT3O60512 393 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 OFD1O75665 1012 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 SPINK2P20155 84 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 CNR2P34972 360 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 FNTBP49356 437 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 NOVA1P51513 510 aaKnown RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 SRSF5Q13243 272 aaKnown RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 ITGB3BPQ13352 177 aaPredicted RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 SEC23AQ15436 765 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 UBE2SQ16763 222 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 IMMTQ16891 758 aaKnown RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 EFCAB12Q6NXP0 572 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 MIS18BP1Q6P0N0 1132 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 GRASPQ7Z6J2 395 aaPredicted RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 GLYCTKQ8IVS8 523 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 CCDC60Q8IWA6 550 aaPredicted RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 LRRC71Q8N4P6 559 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 FAM160A2Q8N612 972 aaPredicted RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 FGF13Q92913 245 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 MXRA8Q9BRK3 442 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 TMEM175Q9BSA9 504 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 LSM14BQ9BX40 385 aaKnown RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 CHST12Q9NRB3 414 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 HEBP1Q9NRV9 189 aa10.85□□□□□ -0.67
KARS-209ENST00000568378 PRG3Q9Y2Y8 225 aaPredicted RBP10.85□□□□□ -0.67
KARS-209ENST00000568378 MEIS3P2A8K0S8 358 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 NRP1O14786 923 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 AXIN1O15169 862 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 TGM5O43548 720 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 PAPLNO95428 1278 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 CXCL12P48061 93 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 GPC3P51654 580 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 NTHL1P78549 312 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 ZNF252P-AS1Q0IIN9 211 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 FZD5Q13467 585 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 CCDC6Q16204 474 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 SWSAP1Q6NVH7 229 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 ABHD15Q6UXT9 468 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 TAS1R1Q7RTX1 841 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 PGBD4Q96DM1 585 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 RXFP1Q9HBX9 757 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 AGO4Q9HCK5 861 aaKnown RBP10.84□□□□□ -0.67
KARS-209ENST00000568378 RXFP3Q9NSD7 469 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 FAM105AQ9NUU6 356 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
KARS-209ENST00000568378 PCDHA6Q9UN73 950 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 PCDHA8Q9Y5H6 950 aa10.84□□□□□ -0.67
KARS-209ENST00000568378 ERICH2A1L162 156 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 MAN2B1O00754 1011 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 CSDE1O75534 798 aaKnown RBP10.83□□□□□ -0.68
KARS-209ENST00000568378 ZMYND10O75800 440 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 DDHD2O94830 711 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 CCNE2O96020 404 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 SFPQP23246 707 aaKnown RBP eCLIP10.83□□□□□ -0.68
KARS-209ENST00000568378 RAB27AP51159 221 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 SATB1Q01826 763 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 HEATR6Q6AI08 1181 aaKnown RBP10.83□□□□□ -0.68
KARS-209ENST00000568378 MAMSTRQ6ZN01 415 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 LONP2Q86WA8 852 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 TMEM121BQ9BXQ6 578 aaPredicted RBP10.83□□□□□ -0.68
KARS-209ENST00000568378 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
KARS-209ENST00000568378 KANSL3Q9P2N6 904 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 TCEAL9Q9UHQ7 104 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 POLIQ9UNA4 740 aa10.83□□□□□ -0.68
KARS-209ENST00000568378 PIN4Q9Y237 131 aaKnown RBP10.83□□□□□ -0.68
KARS-209ENST00000568378 C1RP00736 705 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 POMCP01189 267 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 ZNF806P0C7X5 589 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 ATP4AP20648 1035 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 OR1G1P47890 313 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 DSG1Q02413 1049 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 LIN9Q5TKA1 542 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 RNF43Q68DV7 783 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 CYB5R4Q7L1T6 521 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 CATIPQ7Z7H3 387 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 TICAM2Q86XR7 235 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 ITFG1Q8TB96 612 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 GATA6Q92908 595 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 TRAIPQ9BWF2 469 aa10.82□□□□□ -0.68
KARS-209ENST00000568378 SPZ1Q9BXG8 430 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms