RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 POLR2MP0CAP2 368 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 TNFRSF8P28908 595 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 SCTRP47872 440 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 STAT2P52630 851 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 BFSP1Q12934 665 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 CALCOCO2Q13137 446 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 ORC2Q13416 577 aaPredicted RBP9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 PADI6Q6TGC4 694 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 CCDC91Q7Z6B0 441 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 HOOK3Q86VS8 718 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 CBWD2Q8IUF1 395 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 UBL4BQ8N7F7 174 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 CCDC197Q8NCU1 140 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 ATP8B4Q8TF62 1192 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 CNKSR2Q8WXI2 1034 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 CHMP6Q96FZ7 201 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 STK33Q9BYT3 514 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 VCPKMTQ9H867 229 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 FGFR1OP2Q9NVK5 253 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 L3MBTL1Q9Y468 752 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 DDX3YO15523 660 aaKnown RBP9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 SMARCA1P28370 1054 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 ERFP50548 548 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 SEMA3FQ13275 785 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 SNCBQ16143 134 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 SYCP2LQ5T4T6 812 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 CYB5D1Q6P9G0 228 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 SEPT12Q8IYM1 358 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 KCNV2Q8TDN2 545 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 PRMT6Q96LA8 375 aaPredicted RBP9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 C9orf72Q96LT7 481 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 WDR11Q9BZH6 1224 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 ABCF3Q9NUQ8 709 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 MTRF1LQ9UGC7 380 aaKnown RBP9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 SLC12A6Q9UHW9 1150 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 PITPNM2Q9BZ72 1349 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 TESPA1A2RU30 521 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 RASGRF2O14827 1237 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 TOM1O60784 492 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 GBP2P32456 591 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 MXI1P50539 228 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 NAA25Q14CX7 972 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ANKRD20A8PQ5CZ79 823 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 NUGGCQ68CJ6 796 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 GSTA5Q7RTV2 222 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 CNPY4Q8N129 248 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 PRPF38AQ8NAV1 312 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 IL31RAQ8NI17 732 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 CPA5Q8WXQ8 436 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 PRCCQ92733 491 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 HES6Q96HZ4 224 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 PCDHB18PQ96TA0 734 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 TMEM59LQ9UK28 342 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 TRIM33Q9UPN9 1127 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ZMYM2Q9UBW7 1377 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 TCP11X1B4DZS4 312 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 IPO5O00410 1097 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ECE2O60344 883 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 SKAP2O75563 359 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 CYP3A4P08684 503 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 BCRP11274 1271 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 SREBF1P36956 1147 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 PSMC4P43686 418 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 FNTAP49354 379 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 CETN1Q12798 172 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 MAPK7Q13164 816 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 AP3B2Q13367 1082 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 KYNUQ16719 465 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 OTOP1Q7RTM1 612 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ZNF720Q7Z2F6 126 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ZDHHC14Q8IZN3 488 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 MREGQ8N565 214 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 PRELID2Q8N945 189 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ZNF564Q8TBZ8 553 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ZKSCAN4Q969J2 545 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 SLITRK6Q9H5Y7 841 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ANAPC7Q9UJX3 599 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 TNRC6CQ9HCJ0 1690 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 DDX60LQ5H9U9 1706 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 PI4K2BG5E9Z4 385 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 SPAG7O75391 227 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 GH1P01241 217 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 TMEM253P0C7T8 217 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 YY1P25490 414 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 VAMP7P51809 220 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 PRELPP51888 382 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 JAM2P57087 298 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 BIRC3Q13489 604 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 SGO2Q562F6 1265 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 RNF207Q6ZRF8 634 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 TMEM179Q6ZVK1 233 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 NOP9Q86U38 636 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 PARP9Q8IXQ6 854 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 SRRM1Q8IYB3 904 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 ANKS4BQ8N8V4 417 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 DCAF4Q8WV16 495 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 CCDC17Q96LX7 622 aa9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 TPX2Q9ULW0 747 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 CTDP1Q9Y5B0 961 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-206ENST00000568294 A8MUI8 341 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms