RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 MUTYHQ9UIF7 546 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
SF3B3-211ENST00000568291 ARHGEF35A5YM69 484 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 INO80B-WBP1J3KQ70 363 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 DGAT1O75907 488 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 HOXA11P31270 313 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 NRIP1P48552 1158 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 AFF1P51825 1210 aaKnown RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 ATP2C1P98194 919 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 RAD51AP2Q09MP3 1159 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 RESTQ13127 1097 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 ORC2Q13416 577 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 ADAM15Q13444 863 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 PDIA5Q14554 519 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 SF3A1Q15459 793 aaKnown RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 HERC4Q5GLZ8 1057 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 CLLU1OSQ5K130 101 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 ODR4Q5SWX8 454 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 SPOUT1Q5T280 376 aaKnown RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 HFE2Q6ZVN8 426 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 ALYREFQ86V81 257 aaKnown RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 ZNF410Q86VK4 478 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 EFHBQ8N7U6 833 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 SMRP1Q8NCR6 262 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 TCP11Q8WWU5 503 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 MSLNLQ96KJ4 702 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 CASD1Q96PB1 797 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 PNMA5Q96PV4 448 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 KIFC3Q9BVG8 833 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 INO80BQ9C086 356 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 C1orf112Q9NSG2 853 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 TMEM161AQ9NX61 479 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 BARX2Q9UMQ3 279 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-211ENST00000568291 MTMR6Q9Y217 621 aa10.55□□□□□ -0.72
SF3B3-211ENST00000568291 NPHP3-ACAD11A0A0J9YXS1 232 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 A0A0U1RQF3 1178 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 LRRIQ4A6NIV6 560 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 SFI1A8K8P3 1242 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 GLP2RO95838 553 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 SSBP05455 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
SF3B3-211ENST00000568291 SFPQP23246 707 aaKnown RBP eCLIP10.54□□□□□ -0.72
SF3B3-211ENST00000568291 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-211ENST00000568291 PHKA2P46019 1235 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 PTENP60484 403 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 CDC42EP1Q00587 391 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 NHLH1Q02575 133 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 DHX8Q14562 1220 aaKnown RBP10.54□□□□□ -0.72
SF3B3-211ENST00000568291 UBXN11Q5T124 520 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 KRT79Q5XKE5 535 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
SF3B3-211ENST00000568291 RNF135Q8IUD6 432 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 LRRC15Q8TF66 581 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 RUSC1Q9BVN2 902 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 EIF2AQ9BY44 585 aaKnown RBP10.54□□□□□ -0.72
SF3B3-211ENST00000568291 KCNH6Q9H252 994 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 DBR1Q9UK59 544 aaKnown RBP10.54□□□□□ -0.72
SF3B3-211ENST00000568291 INPP5FQ9Y2H2 1132 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 USP15Q9Y4E8 981 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-211ENST00000568291 HES2Q9Y543 173 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 C5orf42Q9H799 3197 aa10.54□□□□□ -0.72
SF3B3-211ENST00000568291 NT5C1B-RDH14C9J2C7 533 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 ASAP2O43150 1006 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 TSPAN1O60635 241 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 EYA4O95677 639 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 EDN1P05305 212 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 XRCC6P12956 609 aaKnown RBP eCLIP10.53□□□□□ -0.72
SF3B3-211ENST00000568291 CYP11B2P19099 503 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 PRPHP41219 470 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 MBTD1Q05BQ5 628 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 COASYQ13057 564 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 PKP1Q13835 747 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 HAUS3Q68CZ6 603 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 USP49Q70CQ1 688 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 SRGAP1Q7Z6B7 1085 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
SF3B3-211ENST00000568291 HSCBQ8IWL3 235 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 EXOC8Q8IYI6 725 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 THNSL1Q8IYQ7 743 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 COLGALT1Q8NBJ5 622 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 SNX21Q969T3 373 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 FBXL18Q96ME1 805 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 CLIC6Q96NY7 704 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 APOL6Q9BWW8 343 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 GBP3Q9H0R5 595 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 CWH43Q9H720 699 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 TLR9Q9NR96 1032 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 AAASQ9NRG9 546 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 AGPAT5Q9NUQ2 364 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 FAM105AQ9NUU6 356 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 CLEC1BQ9P126 229 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 TFIP11Q9UBB9 837 aaKnown RBP10.53□□□□□ -0.72
SF3B3-211ENST00000568291 DNM3Q9UQ16 869 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 PPME1Q9Y570 386 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 PCDHB2Q9Y5E7 798 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 PCDHB12Q9Y5F1 795 aa10.53□□□□□ -0.72
SF3B3-211ENST00000568291 LAD1O00515 517 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 STX6O43752 255 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 B4GALT3O60512 393 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms