RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ZNF536O15090 1300 aa8.25□□□□□ -1.09
ATXN3-250ENST00000568290 LRRC37AA6NMS7 1700 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 E7EVH7 732 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 F8VZ95 297 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 F8W031 263 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 H0YIN7 160 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 MAFGO15525 162 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 THAP12O43422 761 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 NCK2O43639 380 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 PPP1R11O60927 126 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 PHF2O75151 1096 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 ZC3H11AO75152 810 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 AKAP3O75969 853 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 MTA2O94776 668 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 LYPLA2O95372 231 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 NDUFB10O96000 172 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 AGTP01019 485 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 NUDT17P0C025 328 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 SPATA31C1P0DKV0 1188 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 MYBL2P10244 700 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 GHRP10912 638 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 SLC9A1P19634 815 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 SLC8A1P32418 973 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 HSD17B3P37058 310 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 SLC1A1P43005 524 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 GUCY2FP51841 1108 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 JAK3P52333 1124 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 GTF2A1P52655 376 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 GALCP54803 685 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 DRAP1Q14919 205 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 GRIK5Q16478 980 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 PTGISQ16647 500 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 KRT71Q3SY84 523 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 C1orf186Q6ZWK4 172 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 OTUD6AQ7L8S5 288 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 OTOP1Q7RTM1 612 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 CPLX4Q7Z7G2 160 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 NLRP14Q86W24 1093 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 ZNF677Q86XU0 584 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 METTL13Q8N6R0 699 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 XXYLT1Q8NBI6 393 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 GDAP1L1Q96MZ0 367 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 AGPAT1Q99943 283 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 ERP44Q9BS26 406 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 TMEM109Q9BVC6 243 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 INTS2Q9H0H0 1204 aaKnown RBP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 CENPHQ9H3R5 247 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 YY1AP1Q9H869 796 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 DDX4Q9NQI0 724 aaKnown RBP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 SEPT11Q9NVA2 429 aaKnown RBP8.24□□□□□ -1.09
ATXN3-250ENST00000568290 DMAC2Q9NW81 257 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 CTTNBP2NLQ9P2B4 639 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 VAV3Q9UKW4 847 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 TMX2Q9Y320 296 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 KIF13BQ9NQT8 1826 aa8.24□□□□□ -1.09
ATXN3-250ENST00000568290 LTBP4Q8N2S1 1624 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 RGS16O15492 202 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 PPFIA2O75334 1257 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 PSMD10O75832 226 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 GAS8O95995 478 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 FGGP02679 453 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 VIL1P09327 827 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 SSTR3P32745 418 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 VAMP7P51809 220 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 DHX9Q08211 1270 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 DDR1Q08345 913 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 NR1H3Q13133 447 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 PRPF4BQ13523 1007 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 TTLL12Q14166 644 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 ECM1Q16610 540 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 USH1GQ495M9 461 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 TTMPQ5BVD1 217 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 KIAA1755Q5JYT7 1200 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 RNF187Q5TA31 235 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 TRIM72Q6ZMU5 477 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 TRMT10CQ7L0Y3 403 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 MIER3Q7Z3K6 550 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 COL23A1Q86Y22 540 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 SLC30A5Q8TAD4 765 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 SLC35G2Q8TBE7 412 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 ZNF473Q8WTR7 871 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 HDAC7Q8WUI4 952 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 GJA10Q969M2 543 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 KCTD12Q96CX2 325 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 HOOK2Q96ED9 719 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 MS4A14Q96JA4 679 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 RNPC3Q96LT9 517 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 CCT8L2Q96SF2 557 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 PABPC3Q9H361 631 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 A1CFQ9NQ94 594 aaKnown RBP8.23□□□□□ -1.09
ATXN3-250ENST00000568290 AGPAT3Q9NRZ7 376 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 PCYOX1Q9UHG3 505 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 NENFQ9UMX5 172 aa8.23□□□□□ -1.09
ATXN3-250ENST00000568290 TFR2Q9UP52 801 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms