RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 GSDMBQ8TAX9 411 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 ELMO3Q96BJ8 720 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 NUP85Q9BW27 656 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 FGFBP2Q9BYJ0 223 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 RXFP1Q9HBX9 757 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 CCDC87Q9NVE4 849 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 PPARGC1AQ9UBK2 798 aaKnown RBP11.66□□□□□ -0.54
PALB2-206ENST00000568219 AKAP3O75969 853 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 HAUS5O94927 633 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 EPHB1P54762 984 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 RHOT2Q8IXI1 618 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 TTC8Q8TAM2 541 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 PNMA5Q96PV4 448 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 SLCO1B3Q9NPD5 702 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 MAD2L2Q9UI95 211 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 PHTF1Q9UMS5 762 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 HSPA6P17066 643 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 GRAMD1BQ3KR37 738 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 MIS18BP1Q6P0N0 1132 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 LRRC55Q6ZSA7 311 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 SDCCAG8Q86SQ7 713 aaPredicted RBP11.66□□□□□ -0.54
PALB2-206ENST00000568219 EXOC3L1Q86VI1 746 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 SPATA24Q86W54 205 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 ANKMY2Q8IV38 441 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 C4orf32Q8N8J7 132 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 SCFD1Q8WVM8 642 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 ZNF570Q96NI8 536 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 ERVK-5Q9HDB9 667 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 MINPP1Q9UNW1 487 aa11.66□□□□□ -0.54
PALB2-206ENST00000568219 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 K7ENM7 598 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 RIPK2O43353 540 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 PECAM1P16284 738 aaPredicted RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 MARK3P27448 753 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 MARCKSL1P49006 195 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 ITGA8P53708 1063 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 LACTB2Q53H82 288 aaPredicted RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 MTDHQ86UE4 582 aaKnown RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 WDR66Q8TBY9 1149 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 SNRNP27Q8WVK2 155 aaKnown RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 SYN2Q92777 582 aaPredicted RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 TRABDQ9H4I3 376 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 ADAM22Q9P0K1 906 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 KDM6AO15550 1401 aaPredicted RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 ATXN2Q99700 1313 aaKnown RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 I3L4J1 428 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 SGK1O00141 431 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 PTENP60484 403 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 AUHQ13825 339 aaKnown RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 ZYXQ15942 572 aaKnown RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 DBN1Q16643 649 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 BBS9Q3SYG4 887 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 TAF1BQ53T94 588 aaPredicted RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 AGGF1Q8N302 714 aaeCLIP11.65□□□□□ -0.54
PALB2-206ENST00000568219 ZNF564Q8TBZ8 553 aaPredicted RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 ARHGEF26Q96DR7 871 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 PLA2G12BQ9BX93 195 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 MYLK2Q9H1R3 596 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 CARD9Q9H257 536 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 LRRC4CQ9HCJ2 640 aa11.65□□□□□ -0.54
PALB2-206ENST00000568219 MARCOQ9UEW3 520 aaPredicted RBP11.65□□□□□ -0.54
PALB2-206ENST00000568219 FAM47DPA6NHR8 397 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 MIF4GDA9UHW6 222 aaKnown RBP11.65□□□□□ -0.55
PALB2-206ENST00000568219 USP17L10C9JJH3 530 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 ATP9AO75110 1047 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 ATP5HO75947 161 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 CALB2P22676 271 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 PIK3CAP42336 1068 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 DCUN1D2Q6PH85 259 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.65□□□□□ -0.55
PALB2-206ENST00000568219 GRK7Q8WTQ7 553 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 RMDN2Q96LZ7 410 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 REEP2Q9BRK0 252 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 DHX36Q9H2U1 1008 aaKnown RBP11.65□□□□□ -0.55
PALB2-206ENST00000568219 TAS2R14Q9NYV8 317 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 AIPL1Q9NZN9 384 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 LARSQ9P2J5 1176 aaKnown RBP11.65□□□□□ -0.55
PALB2-206ENST00000568219 MYO5BQ9ULV0 1848 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.55
PALB2-206ENST00000568219 FAM196BA6NMK8 535 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 PI4K2BG5E9Z4 385 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 FOXN3O00409 490 aaPredicted RBP11.64□□□□□ -0.55
PALB2-206ENST00000568219 CDH16O75309 829 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 HLA-DOAP06340 250 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 RARAP10276 462 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 RARGP13631 454 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 PGM1P36871 562 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 PTDSS1P48651 473 aaKnown RBP11.64□□□□□ -0.55
PALB2-206ENST00000568219 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 THOC5Q13769 683 aaKnown RBP11.64□□□□□ -0.55
PALB2-206ENST00000568219 C1orf146Q5VVC0 180 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 SNX30Q5VWJ9 437 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 OLFML2BQ68BL8 750 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 ZBED8Q8IZ13 594 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 TEX9Q8N6V9 391 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 CNBD1Q8NA66 436 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 PGM2Q96G03 612 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 RBM15Q96T37 977 aaKnown RBP eCLIP11.64□□□□□ -0.55
PALB2-206ENST00000568219 IKZF4Q9H2S9 585 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms