RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 TWF2Q6IBS0 349 aaKnown RBP13.59□□□□□ -0.23
FANCA-229ENST00000567988 SPIRE2Q8WWL2 714 aa13.59□□□□□ -0.23
FANCA-229ENST00000567988 RAD54LQ92698 747 aa13.59□□□□□ -0.23
FANCA-229ENST00000567988 FIZ1Q96SL8 496 aa13.59□□□□□ -0.23
FANCA-229ENST00000567988 KIFC3Q9BVG8 833 aa13.59□□□□□ -0.23
FANCA-229ENST00000567988 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
FANCA-229ENST00000567988 C2orf40Q9H1Z8 148 aa13.59□□□□□ -0.23
FANCA-229ENST00000567988 C17orf75Q9HAS0 396 aa13.59□□□□□ -0.23
FANCA-229ENST00000567988 TYW1Q9NV66 732 aaKnown RBP13.59□□□□□ -0.23
FANCA-229ENST00000567988 PRMT7Q9NVM4 692 aaPredicted RBP13.59□□□□□ -0.23
FANCA-229ENST00000567988 LRFN2Q9ULH4 789 aa13.59□□□□□ -0.23
FANCA-229ENST00000567988 PCDHB2Q9Y5E7 798 aa13.59□□□□□ -0.23
FANCA-229ENST00000567988 TTC28Q96AY4 2481 aa13.58□□□□□ -0.23
FANCA-229ENST00000567988 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.23
FANCA-229ENST00000567988 LRRIQ4A6NIV6 560 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 ACKR2O00590 384 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 ABLIM1O14639 778 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 GRM6O15303 877 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 OFD1O75665 1012 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 ITGB1P05556 798 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 SKIP12755 728 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 DNAJB1P25685 340 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 CTNNB1P35222 781 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 AFF1P51825 1210 aaKnown RBP13.58□□□□□ -0.24
FANCA-229ENST00000567988 CEBPZQ03701 1054 aaKnown RBP13.58□□□□□ -0.24
FANCA-229ENST00000567988 PPP2R5AQ15172 486 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 PAN2Q504Q3 1202 aaKnown RBP13.58□□□□□ -0.24
FANCA-229ENST00000567988 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 NT5DC1Q5TFE4 455 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 ATL3Q6DD88 541 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 NOTUMQ6P988 496 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 KRI1Q8N9T8 703 aaKnown RBP13.58□□□□□ -0.24
FANCA-229ENST00000567988 GSTCDQ8NEC7 633 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 LPPQ93052 612 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 MRPL38Q96DV4 380 aaKnown RBP13.58□□□□□ -0.24
FANCA-229ENST00000567988 CPB2Q96IY4 423 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 PLIN2Q99541 437 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 PTPRHQ9HD43 1115 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 PLAGL2Q9UPG8 496 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 IPPQ9Y573 584 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 CUL9Q8IWT3 2517 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 BRWD1Q9NSI6 2320 aa13.58□□□□□ -0.24
FANCA-229ENST00000567988 SPTLC2O15270 562 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 GPM6BQ13491 265 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 E2F4Q16254 413 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 LRRC43Q8N309 656 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 COLGALT1Q8NBJ5 622 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 TMEM161BQ8NDZ6 487 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 SPPL3Q8TCT6 385 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 HELQQ8TDG4 1101 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 CALML4Q96GE6 196 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 DRC1Q96MC2 740 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 C11orf84Q9BUA3 381 aaPredicted RBP13.57□□□□□ -0.24
FANCA-229ENST00000567988 LMAN2LQ9H0V9 348 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 TMEM134Q9H6X4 195 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 ODF2LQ9ULJ1 636 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 PHLPP2Q6ZVD8 1323 aa13.57□□□□□ -0.24
FANCA-229ENST00000567988 NPHP3-ACAD11A0A0J9YXS1 232 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 ERLIN2O94905 339 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 EFEMP2O95967 443 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 PRKCBP05771 671 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 PLS3P13797 630 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 IGFBP4P22692 258 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 PROZP22891 400 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 EFNA5P52803 228 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 NCKAP1LP55160 1127 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 GIT2Q14161 759 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 MCM6Q14566 821 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 EEF1DP3Q658K8 133 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 SLC27A1Q6PCB7 646 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 SHC4Q6S5L8 630 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 ZBTB8OSQ8IWT0 167 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 KLHL23Q8NBE8 558 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 CNNM3Q8NE01 707 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 LARP4BQ92615 738 aaKnown RBP13.56□□□□□ -0.24
FANCA-229ENST00000567988 ZNF396Q96N95 335 aaPredicted RBP13.56□□□□□ -0.24
FANCA-229ENST00000567988 NXF3Q9H4D5 531 aaKnown RBP13.56□□□□□ -0.24
FANCA-229ENST00000567988 PRDM6Q9NQX0 595 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 TBC1D13Q9NVG8 400 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 TFIP11Q9UBB9 837 aaKnown RBP13.56□□□□□ -0.24
FANCA-229ENST00000567988 STK17AQ9UEE5 414 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
FANCA-229ENST00000567988 RCOR1Q9UKL0 485 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 USP20Q9Y2K6 914 aa13.56□□□□□ -0.24
FANCA-229ENST00000567988 MYO7AQ13402 2215 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
FANCA-229ENST00000567988 MAPTP10636 758 aaKnown RBP13.55□□□□□ -0.24
FANCA-229ENST00000567988 LAG3P18627 525 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 PEX3P56589 373 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 PLCB3Q01970 1234 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 DNM1Q05193 864 aaKnown RBP13.55□□□□□ -0.24
FANCA-229ENST00000567988 DSC1Q08554 894 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 ZRSR1Q15695 479 aaKnown RBP13.55□□□□□ -0.24
FANCA-229ENST00000567988 MAPK6Q16659 721 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 NOMO2Q5JPE7 1267 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms