RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SYCP3Q8IZU3 236 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 NEK11Q8NG66 645 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 FGD4Q96M96 766 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 C16orf45Q96MC5 204 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-221ENST00000567935 NIFKQ9BYG3 293 aaKnown RBP15.98■□□□□ 0.15
COMMD4-221ENST00000567935 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 AGPAT3Q9NRZ7 376 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 NRBP2Q9NSY0 501 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 FRMD4BQ9Y2L6 1034 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 PPP2R2CQ9Y2T4 447 aa15.98■□□□□ 0.15
COMMD4-221ENST00000567935 GTPBP10A4D1E9 387 aaKnown RBP15.97■□□□□ 0.15
COMMD4-221ENST00000567935 MAPK13O15264 365 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 AFPP02771 609 aaKnown RBP15.97■□□□□ 0.15
COMMD4-221ENST00000567935 CNGA1P29973 690 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 SLC26A2P50443 739 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 SP2Q02086 613 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 TMEM31Q5JXX7 168 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 FAM102BQ5T8I3 360 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 PLA2G4FQ68DD2 849 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 HAUS6Q7Z4H7 955 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 CCDC170Q8IYT3 715 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 IFT74Q96LB3 600 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 TRMT1Q9NXH9 659 aaKnown RBP15.97■□□□□ 0.15
COMMD4-221ENST00000567935 SEPT9Q9UHD8 586 aaPredicted RBP15.97■□□□□ 0.15
COMMD4-221ENST00000567935 DDX41Q9UJV9 622 aaKnown RBP15.97■□□□□ 0.15
COMMD4-221ENST00000567935 DIS3Q9Y2L1 958 aaKnown RBP15.97■□□□□ 0.15
COMMD4-221ENST00000567935 IVNS1ABPQ9Y6Y0 642 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
COMMD4-221ENST00000567935 USP27XA6NNY8 438 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 GAS2O43903 313 aaKnown RBP15.96■□□□□ 0.15
COMMD4-221ENST00000567935 AKAP3O75969 853 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 GGPS1O95749 300 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 PBX2P40425 430 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 NPEPPSP55786 919 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 KCNH2Q12809 1159 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 ZC2HC1CQ53FD0 456 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-221ENST00000567935 WDR78Q5VTH9 848 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 MFSD14CQ5VZR4 134 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 PLEKHH3Q7Z736 793 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 FAM186BQ8IYM0 893 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 TRPV1Q8NER1 839 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 KIF18AQ8NI77 898 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 SYN2Q92777 582 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-221ENST00000567935 AZI2Q9H6S1 392 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 MMRN2Q9H8L6 949 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 MLXIPQ9HAP2 919 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 VTA1Q9NP79 307 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 C11orf16Q9NQ32 467 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 PLCB1Q9NQ66 1216 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 CEP72Q9P209 647 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 MUC6Q6W4X9 2439 aa15.96■□□□□ 0.15
COMMD4-221ENST00000567935 GSTTP1A0A1W2PQM5 241 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 MSCO60682 206 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 LGR5O75473 907 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 PGK2P07205 417 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 CYLC1P35663 651 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-221ENST00000567935 PEX3P56589 373 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 SP4Q02446 784 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 TFF2Q03403 129 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 ENPEPQ07075 957 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 MAP2K5Q13163 448 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 TTLL4Q14679 1199 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 ZNF792Q3KQV3 632 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 CELF3Q5SZQ8 465 aaKnown RBP15.95■□□□□ 0.14
COMMD4-221ENST00000567935 PLPPR4Q7Z2D5 763 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 BORCS6Q96GS4 357 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 KMT5AQ9NQR1 393 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 FBXL5Q9UKA1 691 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 PLAGL2Q9UPG8 496 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 R3HCC1Q9Y3T6 440 aaKnown RBP15.95■□□□□ 0.14
COMMD4-221ENST00000567935 ADGRG1Q9Y653 693 aa15.95■□□□□ 0.14
COMMD4-221ENST00000567935 EMSYQ7Z589 1322 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 ZNF236Q9UL36 1845 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 SOWAHDA6NJG2 315 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 NOP56O00567 594 aaKnown RBP15.94■□□□□ 0.14
COMMD4-221ENST00000567935 CLIC2O15247 247 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 IPO7O95373 1038 aaKnown RBP15.94■□□□□ 0.14
COMMD4-221ENST00000567935 IGFBP4P22692 258 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 NPTX2P47972 431 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 STAT5BP51692 787 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 POLGP54098 1239 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-221ENST00000567935 ETF1P62495 437 aaKnown RBP15.94■□□□□ 0.14
COMMD4-221ENST00000567935 KCNA1Q09470 495 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 CCDC62Q6P9F0 684 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 RAD9BQ6WBX8 426 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 INTS8Q75QN2 995 aaKnown RBP15.94■□□□□ 0.14
COMMD4-221ENST00000567935 MAEAQ7L5Y9 396 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 CACNA2D4Q7Z3S7 1137 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 FMNL3Q8IVF7 1028 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 MAP4K3Q8IVH8 894 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 REXO1L1PQ8IX06 675 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
COMMD4-221ENST00000567935 TMEM161BQ8NDZ6 487 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 SLC7A3Q8WY07 619 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 JPH2Q9BR39 696 aaPredicted RBP15.94■□□□□ 0.14
COMMD4-221ENST00000567935 PBX4Q9BYU1 374 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 DHX33Q9H6R0 707 aaKnown RBP15.94■□□□□ 0.14
COMMD4-221ENST00000567935 SLC5A4Q9NY91 659 aa15.94■□□□□ 0.14
COMMD4-221ENST00000567935 CXXC1Q9P0U4 656 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms