RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 MAP4K3Q8IVH8 894 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 DNAJC5GQ8N7S2 189 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 GOLGA5Q8TBA6 731 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 HVCN1Q96D96 273 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 TUBGCP2Q9BSJ2 902 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 FAM49AQ9H0Q0 323 aaPredicted RBP11.44□□□□□ -0.58
TCF4-236ENST00000567880 PDCL3Q9H2J4 239 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 PCIF1Q9H4Z3 704 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 INTS13Q9NVM9 706 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 HDAC6Q9UBN7 1215 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 USP20Q9Y2K6 914 aa11.44□□□□□ -0.58
TCF4-236ENST00000567880 A0A1B0GTH6 734 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 TEX33O43247 280 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 CASP4P49662 377 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 ZNF200P98182 395 aaPredicted RBP11.43□□□□□ -0.58
TCF4-236ENST00000567880 HIC1Q14526 733 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 FAM47CQ5HY64 1035 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 ARMCX5Q6P1M9 558 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.43□□□□□ -0.58
TCF4-236ENST00000567880 FILIP1Q7Z7B0 1213 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 ZBTB8OSQ8IWT0 167 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 SCLT1Q96NL6 688 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 MAP7D2Q96T17 732 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 CBWD1Q9BRT8 395 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 NOC4LQ9BVI4 516 aaKnown RBP11.43□□□□□ -0.58
TCF4-236ENST00000567880 PTPN22Q9Y2R2 807 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 PHLPP2Q6ZVD8 1323 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 C17orf102A2RUQ5 167 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 ANKRD63C9JTQ0 380 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 TREHO43280 583 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 EXOC3O60645 756 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 MSCO60682 206 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 AKAP3O75969 853 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 CYP2C9P11712 490 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 CDC25BP30305 580 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 ABCD1P33897 745 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 LIG4P49917 911 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 TMEM62Q0P6H9 643 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 TMC6Q7Z403 805 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 RNF180Q86T96 592 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 ZC3H3Q8IXZ2 948 aaKnown RBP11.43□□□□□ -0.58
TCF4-236ENST00000567880 LINC01465Q8N7H1 131 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 RDH13Q8NBN7 331 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 VTI1AQ96AJ9 217 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 GINS2Q9Y248 185 aa11.43□□□□□ -0.58
TCF4-236ENST00000567880 A0A087WZ62 844 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 LRRC10BA6NIK2 292 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 INO80B-WBP1J3KQ70 363 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 ASAP2O43150 1006 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 GNA14O95837 355 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 EPB41P11171 864 aaKnown RBP11.42□□□□□ -0.58
TCF4-236ENST00000567880 CST5P28325 142 aaPredicted RBP11.42□□□□□ -0.58
TCF4-236ENST00000567880 EFNA5P52803 228 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 NKX3-2P78367 333 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 NR1I3Q14994 352 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 SLC9C1Q4G0N8 1177 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 RUFY4Q6ZNE9 571 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 KIAA0319LQ8IZA0 1049 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 PCSK9Q8NBP7 692 aaKnown RBP11.42□□□□□ -0.58
TCF4-236ENST00000567880 KLHDC9Q8NEP7 349 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 NLRP7Q8WX94 980 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 MRRFQ96E11 262 aaKnown RBP11.42□□□□□ -0.58
TCF4-236ENST00000567880 FDXACB1Q9BRP7 624 aaPredicted RBP11.42□□□□□ -0.58
TCF4-236ENST00000567880 INO80BQ9C086 356 aaPredicted RBP11.42□□□□□ -0.58
TCF4-236ENST00000567880 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.42□□□□□ -0.58
TCF4-236ENST00000567880 FRMD4BQ9Y2L6 1034 aa11.42□□□□□ -0.58
TCF4-236ENST00000567880 MBLAC1A4D2B0 266 aaPredicted RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 GOLGA8IPA6NC78 632 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 GOLGA8JA6NMD2 632 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 CSDE1O75534 798 aaKnown RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 EDN1P05305 212 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 GNAT1P11488 350 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 MATR3P43243 847 aaKnown RBP eCLIP11.41□□□□□ -0.585e-7■■■■■ 29.7
TCF4-236ENST00000567880 PHKA2P46019 1235 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 TERF1P54274 439 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 NLRP11P59045 1033 aaKnown RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 UBXN1Q04323 297 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 NFIL3Q16649 462 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 MAPK6Q16659 721 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 MAN2A1Q16706 1144 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 DCAF17Q5H9S7 520 aaPredicted RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 CDCA2Q69YH5 1023 aaPredicted RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 CCSAPQ6IQ19 270 aaPredicted RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 SLC39A4Q6P5W5 647 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 FAM186BQ8IYM0 893 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 DNAJB3Q8WWF6 145 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 POMGNT1Q8WZA1 660 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 SAAL1Q96ER3 474 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 UNC93B1Q9H1C4 597 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 C2orf40Q9H1Z8 148 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 HSPBP1Q9NZL4 362 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 CGNQ9P2M7 1197 aaKnown RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 ANKFY1Q9P2R3 1169 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 ARMCX3Q9UH62 379 aaPredicted RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 LGALS16A8MUM7 142 aa11.41□□□□□ -0.58
TCF4-236ENST00000567880 SLC16A3O15427 465 aaKnown RBP11.41□□□□□ -0.58
TCF4-236ENST00000567880 PRKCBP05771 671 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms