RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 RAB27AP51159 221 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 PTENP60484 403 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 COASYQ13057 564 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 CAPSQ13938 189 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 CATSPER3Q86XQ3 398 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 PGBD4Q96DM1 585 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 LLPHQ9BRT6 129 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 TRAIPQ9BWF2 469 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 EIF2AQ9BY44 585 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 POLR3FQ9H1D9 316 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 POLD4Q9HCU8 107 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 NGRNQ9NPE2 291 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 ANKEF1Q9NU02 776 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 HES2Q9Y543 173 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 PPME1Q9Y570 386 aa13.6□□□□□ -0.23
GTF3C1-208ENST00000567843 B4GALT5O43286 388 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 DCXO43602 365 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 GPR37L1O60883 481 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 DGAT1O75907 488 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 LYPLA2O95372 231 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 SSBP05455 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 OR52Z1P0C646 297 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 ALADP13716 330 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 ARL2P36404 184 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 SMC1AQ14683 1233 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 TTC38Q5R3I4 469 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 PDE12Q6L8Q7 609 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 ANKRD54Q6NXT1 300 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 KANK3Q6NY19 840 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 MRPL10Q7Z7H8 261 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 RNF135Q8IUD6 432 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 MRPL43Q8N983 215 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 SMG8Q8ND04 991 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 FBXO18Q8NFZ0 1043 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 IGSF21Q96ID5 467 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 ZSCAN31Q96LW9 406 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 CDCA3Q99618 268 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 RSAD1Q9HA92 442 aa13.59□□□□□ -0.23
GTF3C1-208ENST00000567843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 C2orf71A6NGG8 1288 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 GAS2O43903 313 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 CLASP2O75122 1294 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 WEE2P0C1S8 567 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 ITGA4P13612 1032 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 LIG1P18858 919 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 RBM25P49756 843 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 MBTD1Q05BQ5 628 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 TFDP1Q14186 410 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 MXD4Q14582 209 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 SYCE2Q6PIF2 218 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 C12orf76Q8N812 135 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 URGCPQ8TCY9 931 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 GAD1Q99259 594 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 VN1R3Q9BXE9 311 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 USP20Q9Y2K6 914 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 PRG3Q9Y2Y8 225 aaPredicted RBP13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 IPPQ9Y573 584 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 HCFC2Q9Y5Z7 792 aa13.58□□□□□ -0.24
GTF3C1-208ENST00000567843 LRRIQ4A6NIV6 560 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 ARF4P18085 180 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 NCLP19338 710 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 AKAP5P24588 427 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 MLH1P40692 756 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 KCNC3Q14003 757 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 AMHR2Q16671 573 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 NOTUMQ6P988 496 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 TMEM87AQ8NBN3 555 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 FEZF2Q8TBJ5 459 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 ZFP42Q96MM3 310 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 FAM193BQ96PV7 902 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 POP1Q99575 1024 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 ZBP1Q9H171 429 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 CSRNP2Q9H175 543 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 S1PR5Q9H228 398 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 SH2B1Q9NRF2 756 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 MIOSQ9NXC5 875 aa13.57□□□□□ -0.24
GTF3C1-208ENST00000567843 F8W810 466 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 NRP1O14786 923 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 NPTXRO95502 500 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 SRGAP2BP0DMP2 458 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 MYBP10242 640 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 EPCAMP16422 314 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 CCT6AP40227 531 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 OR1G1P47890 313 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 SCNN1GP51170 649 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 ECM1Q16610 540 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 PADI6Q6TGC4 694 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 ERMNQ8TAM6 284 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 BSNDQ8WZ55 320 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 RABGGTAQ92696 567 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 NACC1Q96RE7 527 aa13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 PHF7Q9BWX1 381 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-208ENST00000567843 TRIM6Q9C030 488 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms