RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PNMA6FA0A0J9YX94 578 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 ESYT2A0FGR8 921 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 PI4K2BG5E9Z4 385 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 NAALADL2Q58DX5 795 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 ATG9AQ7Z3C6 839 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 HAUS8Q9BT25 410 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 POTEFA5A3E0 1075 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 CAPN9O14815 690 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 POLGP54098 1239 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 HDAC7Q8WUI4 952 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 NAF1Q96HR8 494 aaKnown RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 DNAJC7Q99615 494 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 THTPAQ9BU02 230 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 NUB1Q9Y5A7 615 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 SNUPNO95149 360 aaKnown RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 GLI1P08151 1106 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 UCHL3P15374 230 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 VHLP40337 213 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 CDK8P49336 464 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP11P51784 963 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 OCA2Q04671 838 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 GABPAQ06546 454 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 NXF1Q9UBU9 619 aaKnown RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 A0A1W2PQJ5 194 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 UBE2Q2LH0YL09 131 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 UBOX5O94941 541 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 PDZD4Q76G19 769 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 ANKMY2Q8IV38 441 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 ELOA2Q8IYF1 753 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 KRT82Q9NSB4 513 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 BARHL2Q9NY43 387 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
CSPG4P13-202ENST00000567704 RNF103-CHMP3A0A140T963 221 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZBTB8OSQ8IWT0 167 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 ATP11CQ8NB49 1132 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 MTBPQ96DY7 904 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 RBM15Q96T37 977 aaKnown RBP eCLIP13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 WWP1Q9H0M0 922 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 PFASO15067 1338 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 CNGA1P29973 690 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 PPP1R2P3Q6NXS1 205 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 METTL13Q8N6R0 699 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 SLC44A5Q8NCS7 719 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 KDM4CQ9H3R0 1056 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 B2RBV5 119 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 CLDN3O15551 220 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 CAND2O75155 1236 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 SLC9A1P19634 815 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 PSMA2P25787 234 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 CNGA3Q16281 694 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 EP400NLQ6ZTU2 488 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 ATL2Q8NHH9 583 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 HSPH1Q92598 858 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZKSCAN4Q969J2 545 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 TSSK1BQ9BXA7 367 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 VPS11Q9H270 941 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 SERPINB13Q9UIV8 391 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 ADGRL3Q9HAR2 1447 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZSCAN5CA6NGD5 496 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZCCHC18P0CG32 403 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 TRIP10Q15642 601 aa13.19□□□□□ -0.3
CSPG4P13-202ENST00000567704 CRB1P82279 1406 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 CPA2P48052 419 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 OCRLQ01968 901 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 LAMB3Q13751 1172 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ITIH4Q14624 930 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ZNF394Q53GI3 561 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 XXYLT1Q8NBI6 393 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 THAP11Q96EK4 314 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
CSPG4P13-202ENST00000567704 ROPN1BQ9BZX4 212 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms