RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 S1PR5Q9H228 398 aa16.77■□□□□ 0.28
SCAMP2-209ENST00000567638 RSAD1Q9HA92 442 aa16.77■□□□□ 0.28
SCAMP2-209ENST00000567638 DNAJB4Q9UDY4 337 aa16.77■□□□□ 0.28
SCAMP2-209ENST00000567638 LIMCH1Q9UPQ0 1083 aa16.77■□□□□ 0.28
SCAMP2-209ENST00000567638 HCFC2Q9Y5Z7 792 aa16.77■□□□□ 0.28
SCAMP2-209ENST00000567638 DENND4AQ7Z401 1863 aa16.77■□□□□ 0.27
SCAMP2-209ENST00000567638 POTEMA6NI47 508 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 B4GALT3O60512 393 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 GALTP07902 379 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 HOXB8P17481 243 aaPredicted RBP16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 CA8P35219 290 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 SLC11A1P49279 550 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 RARRES1P49788 294 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 PTENP60484 403 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 GUCY1B3Q02153 619 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 TFDP1Q14186 410 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 PCBP1Q15365 356 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 DDX53Q86TM3 631 aaKnown RBP16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 IFNLR1Q8IU57 520 aaPredicted RBP16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 CCDC83Q8IWF9 413 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 BCL7CQ8WUZ0 217 aaPredicted RBP16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 CCDC43Q96MW1 224 aaKnown RBP16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 GBP3Q9H0R5 595 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 TMEM60Q9H2L4 133 aa16.76■□□□□ 0.27
SCAMP2-209ENST00000567638 ZNF318Q5VUA4 2279 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 TSPAN1O60635 241 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 CLASP2O75122 1294 aaKnown RBP16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 CXCL14O95715 111 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 CTSAP10619 480 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 AXLP30530 894 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 POU5F1BQ06416 359 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 CAPSQ13938 189 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 ZNF280BQ86YH2 543 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 CNNM3Q8NE01 707 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 ASAP3Q8TDY4 903 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 C8orf76Q96K31 380 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 APOL5Q9BWW9 433 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 IRAK3Q9Y616 596 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 C2orf16Q68DN1 1984 aa16.75■□□□□ 0.27
SCAMP2-209ENST00000567638 PLXNA3P51805 1871 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 INO80B-WBP1J3KQ70 363 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 DDHD2O94830 711 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 ATP2B1P20020 1258 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 MCM7P33993 719 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 ARL2P36404 184 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 AFF1P51825 1210 aaKnown RBP16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 MBTD1Q05BQ5 628 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 GIT2Q14161 759 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 TPRNQ4KMQ1 711 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 NOTUMQ6P988 496 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 SMG8Q8ND04 991 aaKnown RBP16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 PIGOQ8TEQ8 1089 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 AUTS2Q8WXX7 1259 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 EDAQ92838 391 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
SCAMP2-209ENST00000567638 KMT2EQ8IZD2 1858 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 USO1O60763 962 aaKnown RBP16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 SPATA31C1P0DKV0 1188 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 ITGA4P13612 1032 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 GLRA2P23416 452 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 AMHR2Q16671 573 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 HFE2Q6ZVN8 426 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 CPB2Q96IY4 423 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 FAM193BQ96PV7 902 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 TMEM175Q9BSA9 504 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 VN1R3Q9BXE9 311 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 EIF2AQ9BY44 585 aaKnown RBP16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 NFKBIZQ9BYH8 718 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 CSRNP2Q9H175 543 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 POLR3FQ9H1D9 316 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 FOXP1Q9H334 677 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 TUFT1Q9NNX1 390 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 UBN1Q9NPG3 1134 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 IPPQ9Y573 584 aa16.73■□□□□ 0.27
SCAMP2-209ENST00000567638 A0A087WWV3 80 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 INPPL1O15357 1258 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 POMCP01189 267 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 ARF4P18085 180 aaPredicted RBP16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 ITIH3Q06033 890 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 NCBP1Q09161 790 aaKnown RBP16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 ORC2Q13416 577 aaPredicted RBP16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 CES5AQ6NT32 575 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 CATSPER3Q86XQ3 398 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 TMEM87AQ8NBN3 555 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 ZSCAN31Q96LW9 406 aaPredicted RBP16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 ADAM7Q9H2U9 754 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 DZANK1Q9NVP4 752 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 STK39Q9UEW8 545 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 CDH22Q9UJ99 828 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 FAN1Q9Y2M0 1017 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 MYO10Q9HD67 2058 aa16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 MTCL1Q9Y4B5 1905 aaKnown RBP16.72■□□□□ 0.27
SCAMP2-209ENST00000567638 NRP1O14786 923 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms