RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 KSR1Q8IVT5 923 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 VN1R2Q8NFZ6 395 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 TMEM143Q96AN5 459 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 PBXIP1Q96AQ6 731 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 ZBP1Q9H171 429 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 S1PR5Q9H228 398 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 ADAM7Q9H2U9 754 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 ANKEF1Q9NU02 776 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 MUC6Q6W4X9 2439 aa20.73■□□□□ 0.91
LINC01238-205ENST00000567549 TMEM221A6NGB7 291 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 NT5C1B-RDH14C9J2C7 533 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 M0R296 226 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 OFD1O75665 1012 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 MRPL10Q7Z7H8 261 aaKnown RBP20.72■□□□□ 0.91
LINC01238-205ENST00000567549 OXER1Q8TDS5 423 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 LPPQ93052 612 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 DYDC2Q96IM9 177 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 TRIM6Q9C030 488 aaPredicted RBP20.72■□□□□ 0.91
LINC01238-205ENST00000567549 GBP3Q9H0R5 595 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 NRDE2Q9H7Z3 1164 aa20.72■□□□□ 0.91
LINC01238-205ENST00000567549 CLASP2O75122 1294 aaKnown RBP20.71■□□□□ 0.91
LINC01238-205ENST00000567549 GALTP07902 379 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 XRCC6P12956 609 aaKnown RBP eCLIP20.71■□□□□ 0.91
LINC01238-205ENST00000567549 ITGA4P13612 1032 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 NCLP19338 710 aaKnown RBP20.71■□□□□ 0.91
LINC01238-205ENST00000567549 CYP4A11Q02928 519 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 PTPN21Q16825 1174 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 ATAT1Q5SQI0 421 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 SYCE2Q6PIF2 218 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 PLCD3Q8N3E9 789 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 EIF2AK1Q9BQI3 630 aaKnown RBP20.71■□□□□ 0.91
LINC01238-205ENST00000567549 IRF2BPLQ9H1B7 796 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 TTC12Q9H892 705 aaPredicted RBP20.71■□□□□ 0.91
LINC01238-205ENST00000567549 RGL1Q9NZL6 768 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 FAN1Q9Y2M0 1017 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 ARID2Q68CP9 1835 aa20.71■□□□□ 0.91
LINC01238-205ENST00000567549 NEK4P51957 841 aa20.7■□□□□ 0.9
LINC01238-205ENST00000567549 SPIRE1Q08AE8 756 aa20.7■□□□□ 0.9
LINC01238-205ENST00000567549 NR5A1Q13285 461 aa20.7■□□□□ 0.9
LINC01238-205ENST00000567549 CTTNQ14247 550 aaKnown RBP20.7■□□□□ 0.9
LINC01238-205ENST00000567549 CABP7Q86V35 215 aa20.7■□□□□ 0.9
LINC01238-205ENST00000567549 DIS3L2Q8IYB7 885 aaKnown RBP20.7■□□□□ 0.9
LINC01238-205ENST00000567549 UBALD2Q8IYN6 164 aa20.7■□□□□ 0.9
LINC01238-205ENST00000567549 NFKBIZQ9BYH8 718 aa20.7■□□□□ 0.9
LINC01238-205ENST00000567549 MRPL17Q9NRX2 175 aaKnown RBP20.7■□□□□ 0.9
LINC01238-205ENST00000567549 C5orf42Q9H799 3197 aa20.7■□□□□ 0.9
LINC01238-205ENST00000567549 INO80B-WBP1J3KQ70 363 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 SLITRK3O94933 977 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 CTDNEP1O95476 244 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 PTENP60484 403 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 RBM10P98175 930 aaKnown RBP20.69■□□□□ 0.9
LINC01238-205ENST00000567549 ORC2Q13416 577 aaPredicted RBP20.69■□□□□ 0.9
LINC01238-205ENST00000567549 ME3Q16798 604 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 LONRF3Q496Y0 759 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 IFNLR1Q8IU57 520 aaPredicted RBP20.69■□□□□ 0.9
LINC01238-205ENST00000567549 FBXL6Q8N531 539 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 ERMNQ8TAM6 284 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 SFXN1Q9H9B4 322 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 TSHZ2Q9NRE2 1034 aa20.69■□□□□ 0.9
LINC01238-205ENST00000567549 WRAP73Q9P2S5 460 aaPredicted RBP20.69■□□□□ 0.9
LINC01238-205ENST00000567549 URODP06132 367 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 TXKP42681 527 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 MTMR3Q13615 1198 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 KIAA1841Q6NSI8 718 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 AGMOQ6ZNB7 445 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 TDRD5Q8NAT2 981 aaKnown RBP20.68■□□□□ 0.9
LINC01238-205ENST00000567549 MCPH1Q8NEM0 835 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 TNFRSF25Q93038 417 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 HSD17B14Q9BPX1 270 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 BMP2KQ9NSY1 1161 aaPredicted RBP20.68■□□□□ 0.9
LINC01238-205ENST00000567549 GJB4Q9NTQ9 266 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 DBR1Q9UK59 544 aaKnown RBP20.68■□□□□ 0.9
LINC01238-205ENST00000567549 USTQ9Y2C2 406 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 ZMYM2Q9UBW7 1377 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 TECTAO75443 2155 aa20.68■□□□□ 0.9
LINC01238-205ENST00000567549 FDPSP14324 419 aaKnown RBP20.67■□□□□ 0.9
LINC01238-205ENST00000567549 KLRC2P26717 231 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 HOXA11P31270 313 aaPredicted RBP20.67■□□□□ 0.9
LINC01238-205ENST00000567549 SLC11A1P49279 550 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 NUBP1P53384 320 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 PTPN5P54829 565 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 NECAB1Q8N987 351 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 ZNF579Q8NAF0 562 aaKnown RBP20.67■□□□□ 0.9
LINC01238-205ENST00000567549 NSUN7Q8NE18 718 aaKnown RBP20.67■□□□□ 0.9
LINC01238-205ENST00000567549 ACSF2Q96CM8 615 aaPredicted RBP20.67■□□□□ 0.9
LINC01238-205ENST00000567549 FBXL18Q96ME1 805 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 APOL5Q9BWW9 433 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 CSRNP2Q9H175 543 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 TUFT1Q9NNX1 390 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 SORCS3Q9UPU3 1222 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 GIT1Q9Y2X7 761 aa20.67■□□□□ 0.9
LINC01238-205ENST00000567549 BTBD18B2RXH4 712 aa20.66■□□□□ 0.9
LINC01238-205ENST00000567549 ADH1AP07327 375 aa20.66■□□□□ 0.9
LINC01238-205ENST00000567549 GNL2Q13823 731 aaKnown RBP20.66■□□□□ 0.9
LINC01238-205ENST00000567549 PTPN14Q15678 1187 aa20.66■□□□□ 0.9
LINC01238-205ENST00000567549 RARS2Q5T160 578 aaKnown RBP20.66■□□□□ 0.9
LINC01238-205ENST00000567549 ZBTB8OSQ8IWT0 167 aa20.66■□□□□ 0.9
LINC01238-205ENST00000567549 PRIMPOLQ96LW4 560 aa20.66■□□□□ 0.9
LINC01238-205ENST00000567549 MINDY3Q9H8M7 445 aa20.66■□□□□ 0.9
LINC01238-205ENST00000567549 DNAJB4Q9UDY4 337 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms