RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ZNHIT2Q9UHR6 403 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 MSRAQ9UJ68 235 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 FZD1Q9UP38 647 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
CDH1-211ENST00000567320 A0A0A6YYK5 440 aaPredicted RBP4.86□□□□□ -1.63
CDH1-211ENST00000567320 DNAJC6O75061 913 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 LAG3P18627 525 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 DUSP2Q05923 314 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 CNNM4Q6P4Q7 775 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 LMBR1LQ6UX01 489 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 LRRC55Q6ZSA7 311 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 HTR3DQ70Z44 454 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 CDYL2Q8N8U2 506 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 CHTF18Q8WVB6 975 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 SOX7Q9BT81 388 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 KANSL2Q9H9L4 492 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 SPON1Q9HCB6 807 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 PACSIN3Q9UKS6 424 aa4.86□□□□□ -1.63
CDH1-211ENST00000567320 ZNF891A8MT65 544 aaPredicted RBP4.85□□□□□ -1.63
CDH1-211ENST00000567320 TRIM24O15164 1050 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 B3GALT2O43825 422 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 HSP90B1P14625 803 aaKnown RBP4.85□□□□□ -1.63
CDH1-211ENST00000567320 NR4A1P22736 598 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 KPNA1P52294 538 aaPredicted RBP4.85□□□□□ -1.63
CDH1-211ENST00000567320 KRTAP1-1Q07627 177 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 PLEKHG4Q58EX7 1191 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 NAIF1Q69YI7 327 aaPredicted RBP4.85□□□□□ -1.63
CDH1-211ENST00000567320 UNC5BQ8IZJ1 945 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 EFHBQ8N7U6 833 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 PIK3C3Q8NEB9 887 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 GAB3Q8WWW8 586 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 IL17RAQ96F46 866 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 ZMAT4Q9H898 229 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 INTS7Q9NVH2 962 aaKnown RBP4.85□□□□□ -1.63
CDH1-211ENST00000567320 TRPM5Q9NZQ8 1165 aa4.85□□□□□ -1.63
CDH1-211ENST00000567320 PRR5-ARHGAP8B1AHC4 643 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 ELL2O00472 640 aaPredicted RBP4.84□□□□□ -1.63
CDH1-211ENST00000567320 NRP2O60462 931 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 LY86O95711 162 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 F2P00734 622 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 CFBP00751 764 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 APOBEC3AP31941 199 aaPredicted RBP4.84□□□□□ -1.63
CDH1-211ENST00000567320 NRG3P56975 720 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 MGAT5Q09328 741 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 CREB3L3Q68CJ9 461 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 CXorf67Q86X51 503 aaPredicted RBP4.84□□□□□ -1.63
CDH1-211ENST00000567320 XYLT1Q86Y38 959 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 GPR101Q96P66 508 aaPredicted RBP4.84□□□□□ -1.63
CDH1-211ENST00000567320 KCNH6Q9H252 994 aa4.84□□□□□ -1.63
CDH1-211ENST00000567320 ZNF768Q9H5H4 540 aaKnown RBP4.84□□□□□ -1.63
CDH1-211ENST00000567320 GRXCR1A8MXD5 290 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 RAB11FIP3O75154 756 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 RFPL3O75679 317 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 GZMKP49863 264 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 COL10A1Q03692 680 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 LRRC32Q14392 662 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 TCEA2Q15560 299 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 VPS72Q15906 364 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 HECTD2Q5U5R9 776 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 RHOUQ7L0Q8 258 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 LCORLQ8N3X6 602 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 SREK1Q8WXA9 508 aaKnown RBP4.83□□□□□ -1.64
CDH1-211ENST00000567320 ZNF496Q96IT1 587 aaPredicted RBP4.83□□□□□ -1.64
CDH1-211ENST00000567320 NDC1Q9BTX1 674 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 CPEB1Q9BZB8 566 aaKnown RBP4.83□□□□□ -1.64
CDH1-211ENST00000567320 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.83□□□□□ -1.64
CDH1-211ENST00000567320 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.83□□□□□ -1.64
CDH1-211ENST00000567320 USP36Q9P275 1121 aaKnown RBP4.83□□□□□ -1.64
CDH1-211ENST00000567320 ANKFY1Q9P2R3 1169 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.83□□□□□ -1.64
CDH1-211ENST00000567320 CD2APQ9Y5K6 639 aa4.83□□□□□ -1.64
CDH1-211ENST00000567320 PRAMEF4O60810 478 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 LMNAP02545 664 aaKnown RBP4.82□□□□□ -1.64
CDH1-211ENST00000567320 SCNN1BP51168 640 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 PTTG1IPP53801 180 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 USP14P54578 494 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 WNT3AP56704 352 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 IL2P60568 153 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 PPARAQ07869 468 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 MRPL49Q13405 166 aaKnown RBP4.82□□□□□ -1.64
CDH1-211ENST00000567320 ZBTB41Q5SVQ8 909 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 IQSEC1Q6DN90 963 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 KIF18BQ86Y91 864 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 MSL3Q8N5Y2 521 aaKnown RBP4.82□□□□□ -1.64
CDH1-211ENST00000567320 SUPT20HQ8NEM7 779 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 OR52N2Q8NGI0 321 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 PDCD2LQ9BRP1 358 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 SLC46A2Q9BY10 475 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 POGKQ9P215 609 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 KCNG1Q9UIX4 513 aa4.82□□□□□ -1.64
CDH1-211ENST00000567320 LCHNA4D1U4 455 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 RNASET2O00584 256 aaKnown RBP4.81□□□□□ -1.64
CDH1-211ENST00000567320 LPXNO60711 386 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 NCR1O76036 304 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 NDUFA10O95299 355 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 PROZP22891 400 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 LSP1P33241 339 aa4.81□□□□□ -1.64
CDH1-211ENST00000567320 RNASE9P60153 205 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms