RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ASAP3Q8TDY4 903 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 PIGOQ8TEQ8 1089 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 IGSF21Q96ID5 467 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 KIF2CQ99661 725 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 PHF7Q9BWX1 381 aaPredicted RBP20.4■□□□□ 0.86
USB1-213ENST00000566292 GBP3Q9H0R5 595 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 ZBP1Q9H171 429 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 HCN4Q9Y3Q4 1203 aa20.4■□□□□ 0.86
USB1-213ENST00000566292 TSPAN1O60635 241 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 DGAT1O75907 488 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 SPATA31C1P0DKV0 1188 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 SRGAP2BP0DMP2 458 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 ARL2P36404 184 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 PLA2G5P39877 138 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 SLC11A1P49279 550 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 RNASELQ05823 741 aaKnown RBP20.39■□□□□ 0.85
USB1-213ENST00000566292 CAPSQ13938 189 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 CBX2Q14781 532 aaPredicted RBP20.39■□□□□ 0.85
USB1-213ENST00000566292 SAFBQ15424 915 aaKnown RBP eCLIP20.39■□□□□ 0.85
USB1-213ENST00000566292 DDX53Q86TM3 631 aaKnown RBP20.39■□□□□ 0.85
USB1-213ENST00000566292 IFNLR1Q8IU57 520 aaPredicted RBP20.39■□□□□ 0.85
USB1-213ENST00000566292 VPS52Q8N1B4 723 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 SMG8Q8ND04 991 aaKnown RBP20.39■□□□□ 0.85
USB1-213ENST00000566292 AUTS2Q8WXX7 1259 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 C8orf76Q96K31 380 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 APOL5Q9BWW9 433 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 RSAD1Q9HA92 442 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 HCFC2Q9Y5Z7 792 aa20.39■□□□□ 0.85
USB1-213ENST00000566292 CNTNAP2Q9UHC6 1331 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 CLASP2O75122 1294 aaKnown RBP20.38■□□□□ 0.85
USB1-213ENST00000566292 DDHD2O94830 711 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 ERLIN2O94905 339 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 CXCL14O95715 111 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 NCLP19338 710 aaKnown RBP20.38■□□□□ 0.85
USB1-213ENST00000566292 GLRA2P23416 452 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 MBTD1Q05BQ5 628 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 URGCPQ8TCY9 931 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 CPB2Q96IY4 423 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 LLPHQ9BRT6 129 aaKnown RBP20.38■□□□□ 0.85
USB1-213ENST00000566292 VN1R3Q9BXE9 311 aa20.38■□□□□ 0.85
USB1-213ENST00000566292 EIF2AQ9BY44 585 aaKnown RBP20.38■□□□□ 0.85
USB1-213ENST00000566292 CARNS1A5YM72 827 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 CTSAP10619 480 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 AXLP30530 894 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 CA8P35219 290 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 POU5F1BQ06416 359 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 TFDP1Q14186 410 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 PCBP1Q15365 356 aaKnown RBP eCLIP20.37■□□□□ 0.85
USB1-213ENST00000566292 AMHR2Q16671 573 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 C8orf34Q49A92 452 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 CATSPER3Q86XQ3 398 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 RPGRIP1Q96KN7 1286 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 POLR3FQ9H1D9 316 aaPredicted RBP20.37■□□□□ 0.85
USB1-213ENST00000566292 CDH22Q9UJ99 828 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 ARIH1Q9Y4X5 557 aaPredicted RBP20.37■□□□□ 0.85
USB1-213ENST00000566292 IPPQ9Y573 584 aa20.37■□□□□ 0.85
USB1-213ENST00000566292 ZNF318Q5VUA4 2279 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.36■□□□□ 0.85
USB1-213ENST00000566292 INO80B-WBP1J3KQ70 363 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 USO1O60763 962 aaKnown RBP20.36■□□□□ 0.85
USB1-213ENST00000566292 MED24O75448 989 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 XRCC6P12956 609 aaKnown RBP eCLIP20.36■□□□□ 0.85
USB1-213ENST00000566292 HOXB8P17481 243 aaPredicted RBP20.36■□□□□ 0.85
USB1-213ENST00000566292 ZNF174Q15697 407 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 NOTUMQ6P988 496 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 FBXO18Q8NFZ0 1043 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 CASP10Q92851 521 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 FAM122AQ96E09 287 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 CCDC43Q96MW1 224 aaKnown RBP20.36■□□□□ 0.85
USB1-213ENST00000566292 RNF39Q9H2S5 420 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 FOXP1Q9H334 677 aaPredicted RBP20.36■□□□□ 0.85
USB1-213ENST00000566292 TUFT1Q9NNX1 390 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 IRAK3Q9Y616 596 aa20.36■□□□□ 0.85
USB1-213ENST00000566292 MUC6Q6W4X9 2439 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 POMCP01189 267 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 ITGA4P13612 1032 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 ARF4P18085 180 aaPredicted RBP20.35■□□□□ 0.85
USB1-213ENST00000566292 BMS1Q14692 1282 aaKnown RBP20.35■□□□□ 0.85
USB1-213ENST00000566292 CNNM3Q8NE01 707 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 CCDC51Q96ER9 411 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 ZSCAN31Q96LW9 406 aaPredicted RBP20.35■□□□□ 0.85
USB1-213ENST00000566292 NFKBIZQ9BYH8 718 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 CSRNP2Q9H175 543 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 GPRC5CQ9NQ84 441 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 HES2Q9Y543 173 aa20.35■□□□□ 0.85
USB1-213ENST00000566292 INPPL1O15357 1258 aa20.34■□□□□ 0.85
USB1-213ENST00000566292 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
USB1-213ENST00000566292 OR52Z1P0C646 297 aa20.34■□□□□ 0.85
USB1-213ENST00000566292 HMGN5P82970 282 aaKnown RBP20.34■□□□□ 0.85
USB1-213ENST00000566292 PTPN14Q15678 1187 aa20.34■□□□□ 0.85
USB1-213ENST00000566292 HFE2Q6ZVN8 426 aa20.34■□□□□ 0.85
USB1-213ENST00000566292 MAEAQ7L5Y9 396 aa20.34■□□□□ 0.85
USB1-213ENST00000566292 EDAQ92838 391 aa20.34■□□□□ 0.85
USB1-213ENST00000566292 TMEM175Q9BSA9 504 aa20.34■□□□□ 0.85
USB1-213ENST00000566292 POLR3CQ9BUI4 534 aaPredicted RBP20.34■□□□□ 0.85
USB1-213ENST00000566292 SH2B1Q9NRF2 756 aaPredicted RBP20.34■□□□□ 0.85
USB1-213ENST00000566292 KANSL3Q9P2N6 904 aa20.34■□□□□ 0.85
USB1-213ENST00000566292 DBR1Q9UK59 544 aaKnown RBP20.34■□□□□ 0.85
USB1-213ENST00000566292 NRP1O14786 923 aa20.33■□□□□ 0.85
USB1-213ENST00000566292 B4GALT5O43286 388 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms