RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	PDCL2	Q8N4E4	241 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	MNS1	Q8NEH6	495 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	RDM1	Q8NG50	284 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	SYN2	Q92777	582 aa	Predicted RBP	11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	SPATA33	Q96N06	139 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	CRISPLD2	Q9H0B8	497 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	MLXIP	Q9HAP2	919 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	AGPAT3	Q9NRZ7	376 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	DMAC2	Q9NW81	257 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	OGDHL	Q9ULD0	1010 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	GUCA1B	Q9UMX6	200 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	PCDHB13	Q9Y5F0	798 aa		11.08	□□□□□ -0.64
TCF4-231	ENST00000566279	KIAA0100	Q14667	2235 aa	Known RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279		K7ENM7	598 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	MAFG	O15525	162 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	MSC	O60682	206 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	USO1	O60763	962 aa	Known RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	IPO7	O95373	1038 aa	Known RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	GH1	P01241	217 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	ZNF286B	P0CG31	522 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	MAPT	P10636	758 aa	Known RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	VAV2	P52735	878 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	GJA9	P57773	515 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	CHMP4BP1	P59074	171 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	KCNA10	Q16322	511 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	ASTE1	Q2TB18	679 aa	Predicted RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	CELF3	Q5SZQ8	465 aa	Known RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	UTP14C	Q5TAP6	766 aa	Known RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	HS2ST1	Q7LGA3	356 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	TRIM50	Q86XT4	487 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	NAPG	Q99747	312 aa	Predicted RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	SH2D3A	Q9BRG2	576 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	MKNK1	Q9BUB5	465 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	GBP3	Q9H0R5	595 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	NUCKS1	Q9H1E3	243 aa	Known RBP	11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	PDCL3	Q9H2J4	239 aa		11.07	□□□□□ -0.64
TCF4-231	ENST00000566279	EFCAB8	A8MWE9	144 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	MMP3	P08254	477 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	ACTN1	P12814	892 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	PLS3	P13797	630 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	PSMC2	P35998	433 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	SPA17	Q15506	151 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	FSCN1	Q16658	493 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	SFMBT2	Q5VUG0	894 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	PLA2G4F	Q68DD2	849 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	CXCL17	Q6UXB2	119 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	FAM186B	Q8IYM0	893 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	TIPIN	Q9BVW5	301 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	AP5M1	Q9H0R1	490 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	PLCB1	Q9NQ66	1216 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	ANKEF1	Q9NU02	776 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	CGN	Q9P2M7	1197 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	TCEAL9	Q9UHQ7	104 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	CDC23	Q9UJX2	597 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	PCDHA13	Q9Y5I0	950 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	PCDHA10	Q9Y5I2	948 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	NFASC	O94856	1347 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	SSU72P8	A0A1W2PR75	194 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	AKR1B10	O60218	316 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	ASGR1	P07306	291 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	MYL3	P08590	195 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	TGFB3	P10600	412 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	SLC9A1	P19634	815 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	PON1	P27169	355 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	NPEPPS	P55786	919 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	AMPD2	Q01433	879 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	ALCAM	Q13740	583 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	SLC9A9	Q8IVB4	645 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	KLHDC9	Q8NEP7	349 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	GOLGA5	Q8TBA6	731 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	PAWR	Q96IZ0	340 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	CCDC43	Q96MW1	224 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	UPF3A	Q9H1J1	476 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	DEF6	Q9H4E7	631 aa		11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	LARS	Q9P2J5	1176 aa	Known RBP	11.06	□□□□□ -0.64
TCF4-231	ENST00000566279	MYH9	P35579	1960 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	GTPBP10	A4D1E9	387 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	KRT86	O43790	486 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	STBD1	O95210	358 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	SERPING1	P05155	500 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	CYP2J2	P51589	502 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	TUBB2A	Q13885	445 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	EXOC3L4	Q17RC7	722 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	XKR9	Q5GH70	373 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	KLHDC7A	Q5VTJ3	777 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	TCERG1L	Q5VWI1	586 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	KCNV1	Q6PIU1	500 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	METTL7B	Q6UX53	244 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	ANO5	Q75V66	913 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	RNF180	Q86T96	592 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	EHBP1	Q8NDI1	1231 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	UBXN4	Q92575	508 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	CDHR1	Q96JP9	859 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	DRC1	Q96MC2	740 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	GPR20	Q99678	358 aa		11.05	□□□□□ -0.64
TCF4-231	ENST00000566279	TUBB2B	Q9BVA1	445 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms