RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 IRS2Q9Y4H2 1338 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 CAPN8A6NHC0 703 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 GOLIM4O00461 696 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 CYP2C8P10632 490 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 IL12RB1P42701 662 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 CACNB3P54284 484 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 MGAT2Q10469 447 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 RNF220Q5VTB9 566 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 GRAMD4Q6IC98 578 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 PPP4R3AQ6IN85 833 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 FAM180AQ6UWF9 173 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 DAAM2Q86T65 1068 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 SRLQ86TD4 932 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 ATG4DQ86TL0 474 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-209ENST00000566240 FAM186BQ8IYM0 893 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 ABI1Q8IZP0 508 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 GPR156Q8NFN8 814 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 OR2I1PQ8NGU4 316 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 C7orf25Q9BPX7 421 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 SYT3Q9BQG1 590 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 STXBP5LQ9Y2K9 1186 aa6.29□□□□□ -1.4
CNOT1-209ENST00000566240 FAM171A2A8MVW0 826 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 FTLP02792 175 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-209ENST00000566240 RPLP2P05387 115 aaKnown RBP6.28□□□□□ -1.4
CNOT1-209ENST00000566240 GLI1P08151 1106 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 MC3RP41968 323 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 ALDH5A1P51649 535 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-209ENST00000566240 MAP2K6P52564 334 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 CD69Q07108 199 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 CNN3Q15417 329 aaKnown RBP6.28□□□□□ -1.4
CNOT1-209ENST00000566240 TARBP2Q15633 366 aaKnown RBP6.28□□□□□ -1.4
CNOT1-209ENST00000566240 ZRSR2Q15696 482 aaKnown RBP6.28□□□□□ -1.4
CNOT1-209ENST00000566240 LONRF1Q17RB8 773 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 WDR72Q3MJ13 1102 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 TTC7BQ86TV6 843 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 STK32CQ86UX6 486 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 DRC7Q8IY82 874 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 PPP1R14CQ8TAE6 165 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 SMARCC2Q8TAQ2 1214 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 KLHDC4Q8TBB5 520 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 RGMAQ96B86 450 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 APOL5Q9BWW9 433 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 PCDH18Q9HCL0 1135 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 KCND1Q9NSA2 647 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 POLR3BQ9NW08 1133 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-209ENST00000566240 SAE1Q9UBE0 346 aaPredicted RBP6.28□□□□□ -1.4
CNOT1-209ENST00000566240 PCDHB1Q9Y5F3 818 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 NR2E3Q9Y5X4 410 aa6.28□□□□□ -1.4
CNOT1-209ENST00000566240 SLC16A6O15403 523 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 AKR1B10O60218 316 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 ATF2P15336 505 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 PEX2P28328 305 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 ITGA1P56199 1179 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 SRSF3P84103 164 aaKnown RBP6.27□□□□□ -1.41
CNOT1-209ENST00000566240 ADAM9Q13443 819 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 SEPT2Q15019 361 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 MAN2A1Q16706 1144 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 GRAMD1BQ3KR37 738 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 CCDC157Q569K6 752 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 B3GNT8Q7Z7M8 397 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 ZNF605Q86T29 641 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 FAM129CQ86XR2 697 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 RHOT1Q8IXI2 618 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 ENAHQ8N8S7 591 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-209ENST00000566240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.27□□□□□ -1.41
CNOT1-209ENST00000566240 CDK5RAP3Q96JB5 506 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 CLIC6Q96NY7 704 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 OSBPL6Q9BZF3 934 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 PTPRHQ9HD43 1115 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 PLCB1Q9NQ66 1216 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-209ENST00000566240 DNAI1Q9UI46 699 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 POLHQ9Y253 713 aa6.27□□□□□ -1.41
CNOT1-209ENST00000566240 RPTORQ8N122 1335 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 A0A088AWK7 358 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 A0A1W2PR48 441 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 CFAP69A5D8W1 941 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 N4BP3O15049 544 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 TMEM127O75204 238 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 LY86O95711 162 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 FOSP01100 380 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-209ENST00000566240 ZKSCAN1P17029 563 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-209ENST00000566240 CTSSP25774 331 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 ADCY8P40145 1251 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 NCKAP1LP55160 1127 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 GPSM2P81274 684 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 MEF2AQ02078 507 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-209ENST00000566240 RTP5Q14D33 572 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 KCNMB1Q16558 191 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 C4orf46Q504U0 113 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 FAM83BQ5T0W9 1011 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 SWSAP1Q6NVH7 229 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 MAEAQ7L5Y9 396 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 OTOP2Q7RTS6 562 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 LDHDQ86WU2 507 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 ZSWIM9Q86XI8 627 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 BCL6BQ8N143 479 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-209ENST00000566240 ACRBPQ8NEB7 543 aa6.26□□□□□ -1.41
CNOT1-209ENST00000566240 NSUN6Q8TEA1 469 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms