RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 PRKCSHP14314 528 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-213ENST00000565834 LIG4P49917 911 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 ZNF200P98182 395 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-213ENST00000565834 MAPK6Q16659 721 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 FAM47CQ5HY64 1035 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 RUFY4Q6ZNE9 571 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 TMEM174Q8WUU8 243 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 SCLT1Q96NL6 688 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 PPP1R16BQ96T49 567 aa20.52■□□□□ 0.88
COMMD4-213ENST00000565834 A0A087WZ62 844 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 PIGRP01833 764 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 PRKCBP05771 671 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 GPC3P51654 580 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 MARSP56192 900 aaKnown RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 CDC42EP1Q00587 391 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 ZNF410Q86VK4 478 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 DRC7Q8IY82 874 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 NLRP7Q8WX94 980 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 VTI1AQ96AJ9 217 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 FDXACB1Q9BRP7 624 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 CBWD1Q9BRT8 395 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 RTN4Q9NQC3 1192 aaKnown RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 INTS13Q9NVM9 706 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 FRMD4BQ9Y2L6 1034 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 INO80B-WBP1J3KQ70 363 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 EXOC3O60645 756 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 AKAP3O75969 853 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 PSMC2P35998 433 aaKnown RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 CASP4P49662 377 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 NLRP11P59045 1033 aaKnown RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 NR1I3Q14994 352 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 SLC39A4Q6P5W5 647 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 SESTD1Q86VW0 696 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 IFNLR1Q8IU57 520 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 MKNK1Q9BUB5 465 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 NOC4LQ9BVI4 516 aaKnown RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 MRPL4Q9BYD3 311 aaKnown RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 INO80BQ9C086 356 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 PCIF1Q9H4Z3 704 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 IFT122Q9HBG6 1241 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 PAK6Q9NQU5 681 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-213ENST00000565834 HSPBP1Q9NZL4 362 aa20.51■□□□□ 0.87
COMMD4-213ENST00000565834 PES1O00541 588 aaKnown RBP20.5■□□□□ 0.87
COMMD4-213ENST00000565834 MYCP01106 439 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-213ENST00000565834 CCL5P13501 91 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 MBTD1Q05BQ5 628 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 MTFR1Q15390 333 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 MAN2A1Q16706 1144 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 GDF6Q6KF10 455 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-213ENST00000565834 TAF2Q6P1X5 1199 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 FRMD5Q7Z6J6 570 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 FAM186BQ8IYM0 893 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 XXYLT1Q8NBI6 393 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 DNAJB3Q8WWF6 145 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 POMGNT1Q8WZA1 660 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 GLT1D1Q96MS3 346 aa20.5■□□□□ 0.87
COMMD4-213ENST00000565834 METTL14Q9HCE5 456 aaKnown RBP20.5■□□□□ 0.87
COMMD4-213ENST00000565834 ARMCX3Q9UH62 379 aaPredicted RBP20.5■□□□□ 0.87
COMMD4-213ENST00000565834 LGALS16A8MUM7 142 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 KBTBD13C9JR72 458 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 EDN1P05305 212 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 GARTP22102 1010 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 ADSSP30520 456 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 LBX1P52954 281 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 ITGA7Q13683 1181 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 ZPBP2Q6X784 338 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 TARS2Q9BW92 718 aaKnown RBP20.49■□□□□ 0.87
COMMD4-213ENST00000565834 RNF208Q9H0X6 261 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 FZD8Q9H461 694 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 MINDY3Q9H8M7 445 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 PRMT7Q9NVM4 692 aaPredicted RBP20.49■□□□□ 0.87
COMMD4-213ENST00000565834 USP20Q9Y2K6 914 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 GRIN2DO15399 1336 aa20.49■□□□□ 0.87
COMMD4-213ENST00000565834 CTCFP49711 727 aaPredicted RBP20.48■□□□□ 0.87
COMMD4-213ENST00000565834 TMEM62Q0P6H9 643 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 KIZQ2M2Z5 673 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 SLFN12LQ6IEE8 588 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 FBXO46Q6PJ61 603 aaPredicted RBP20.48■□□□□ 0.87
COMMD4-213ENST00000565834 TRIM59Q8IWR1 403 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 NME8Q8N427 588 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 SPC24Q8NBT2 197 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 DEFB118Q96PH6 123 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 ACKR2O00590 384 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 TEX33O43247 280 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 HSPA1AP0DMV8 641 aaKnown RBP20.48■□□□□ 0.87
COMMD4-213ENST00000565834 HSPA1BP0DMV9 641 aaKnown RBP20.48■□□□□ 0.87
COMMD4-213ENST00000565834 PRPF4BQ13523 1007 aaKnown RBP20.48■□□□□ 0.87
COMMD4-213ENST00000565834 VWA3BQ502W6 1294 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 MIIPQ5JXC2 388 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 SRGAP1Q7Z6B7 1085 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 ZNF710Q8N1W2 664 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 ADAMTS10Q9H324 1103 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.48■□□□□ 0.87
COMMD4-213ENST00000565834 STYXL1Q9Y6J8 313 aa20.48■□□□□ 0.87
COMMD4-213ENST00000565834 A0A1W2PQ45 241 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-213ENST00000565834 A0A1W2PQY0 241 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 GPR32O75388 356 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 MATR3P43243 847 aaKnown RBP eCLIP20.47■□□□□ 0.87
COMMD4-213ENST00000565834 UBXN1Q04323 297 aa20.47■□□□□ 0.87
COMMD4-213ENST00000565834 PTPN11Q06124 597 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms