RNA–Protein interactions for RNA: ENST00000565628.1

SPIRE2-208, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 3

Gene SPIRE2, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-208ENST00000565628 ACKR2O00590 384 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 SPTLC2O15270 562 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 KRT18P05783 430 aaKnown RBP16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 NCLP19338 710 aaKnown RBP16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 ABCD1P33897 745 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 PPM1AP35813 382 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 ALDH7A1P49419 539 aaKnown RBP16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 PEX3P56589 373 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 KRT17Q04695 432 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 RNASELQ05823 741 aaKnown RBP16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 BMS1Q14692 1282 aaKnown RBP16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 CCDC85BQ15834 202 aaPredicted RBP16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 TIGD5Q53EQ6 642 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 CCDC73Q6ZRK6 1079 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 MRPL10Q7Z7H8 261 aaKnown RBP16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 LINC00301Q8NCQ3 95 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 CASD1Q96PB1 797 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 STK17AQ9UEE5 414 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 ODF2LQ9ULJ1 636 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 COL4A6Q14031 1691 aa16.14■□□□□ 0.17
SPIRE2-208ENST00000565628 N4BP3O15049 544 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 NCK2O43639 380 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 LPXNO60711 386 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 PRKCBP05771 671 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 ITGA4P13612 1032 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 PLS3P13797 630 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 ARF4P18085 180 aaPredicted RBP16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 PLCG1P19174 1290 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 NPTX2P47972 431 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 GATMP50440 423 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 UBE3AQ05086 875 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 STRN3Q13033 797 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 KARSQ15046 597 aaKnown RBP16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 NOMO2Q5JPE7 1267 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 FOXD4L5Q5VV16 416 aaPredicted RBP16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 KCNK18Q7Z418 384 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 SPRED2Q7Z698 418 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 THNSL1Q8IYQ7 743 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 HELQQ8TDG4 1101 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 SPIRE2Q8WWL2 714 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 FOXD4L4Q8WXT5 416 aaPredicted RBP16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 RAD54LQ92698 747 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 EPSTI1Q96J88 318 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 ZNF558Q96NG5 402 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 FAM193BQ96PV7 902 aaPredicted RBP16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 NTPCRQ9BSD7 190 aaKnown RBP16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 RUSC1Q9BVN2 902 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 TMEM134Q9H6X4 195 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 RSAD1Q9HA92 442 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 TFIP11Q9UBB9 837 aaKnown RBP16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
SPIRE2-208ENST00000565628 RBAK-RBAKDNI3L0D1 243 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 ATF7P17544 494 aaPredicted RBP16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 LIG1P18858 919 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 GRIN1Q05586 938 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 AMHR2Q16671 573 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 AAK1Q2M2I8 961 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 CLLU1OSQ5K130 101 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 PDE12Q6L8Q7 609 aaKnown RBP16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 GPBP1Q86WP2 473 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 KLHL23Q8NBE8 558 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 BSNDQ8WZ55 320 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 LARP4BQ92615 738 aaKnown RBP16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 SYMPKQ92797 1274 aaKnown RBP16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 CPB2Q96IY4 423 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 STK39Q9UEW8 545 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 GIT1Q9Y2X7 761 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 IPPQ9Y573 584 aa16.12■□□□□ 0.17
SPIRE2-208ENST00000565628 TBCAO75347 108 aaKnown RBP16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 NR1I2O75469 434 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 OFD1O75665 1012 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 LINC00271P0C7V0 271 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 DHX8Q14562 1220 aaKnown RBP16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 SPECC1Q5M775 1068 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 UBXN11Q5T124 520 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 KCNT2Q6UVM3 1135 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 SV2BQ7L1I2 683 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 COLGALT1Q8NBJ5 622 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 CLIC6Q96NY7 704 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 MRPL4Q9BYD3 311 aaKnown RBP16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 LRRC27Q9C0I9 530 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 PARVGQ9HBI0 331 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 SPG21Q9NZD8 308 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 COG5Q9UP83 839 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 LZTS1Q9Y250 596 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 INPP5FQ9Y2H2 1132 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 TTC3P53804 2025 aa16.11■□□□□ 0.17
SPIRE2-208ENST00000565628 B4GALT5O43286 388 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 CUTAO60888 179 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 FGF18O76093 207 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 FAM13AO94988 1023 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 STAT6P42226 847 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 PLCB3Q01970 1234 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 RAD51AP2Q09MP3 1159 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 DCAF4L1Q3SXM0 396 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 LONRF3Q496Y0 759 aa16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.1■□□□□ 0.17
SPIRE2-208ENST00000565628 DAW1Q8N136 415 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms