RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 PCDHB12Q9Y5F1 795 aa17.05■□□□□ 0.32
COMMD4-212ENST00000565517 ATG2AQ2TAZ0 1938 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 CNTNAP2Q9UHC6 1331 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 PLXNA4Q9HCM2 1894 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 HIP1RO75146 1068 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 LAG3P18627 525 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 MAPK7Q13164 816 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 CCDC85BQ15834 202 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-212ENST00000565517 SPOUT1Q5T280 376 aaKnown RBP17.04■□□□□ 0.32
COMMD4-212ENST00000565517 LRRC55Q6ZSA7 311 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
COMMD4-212ENST00000565517 HELQQ8TDG4 1101 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 CPB2Q96IY4 423 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 NTPCRQ9BSD7 190 aaKnown RBP17.04■□□□□ 0.32
COMMD4-212ENST00000565517 CCDC113Q9H0I3 377 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 POLD4Q9HCU8 107 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 UBN1Q9NPG3 1134 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 PLAGL2Q9UPG8 496 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 PRUNE2Q8WUY3 3088 aa17.04■□□□□ 0.32
COMMD4-212ENST00000565517 PHLPP2Q6ZVD8 1323 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 CARNS1A5YM72 827 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 ACKR2O00590 384 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 PPP6R2O75170 966 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 OFD1O75665 1012 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 YEATS4O95619 227 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 SSBP05455 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
COMMD4-212ENST00000565517 PLCG1P19174 1290 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 TXLNAP40222 546 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 DMP1Q13316 513 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-212ENST00000565517 KARSQ15046 597 aaKnown RBP17.03■□□□□ 0.32
COMMD4-212ENST00000565517 STK38Q15208 465 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 SLC27A1Q6PCB7 646 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 GLB1LQ6UWU2 654 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 AGMOQ6ZNB7 445 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 RASSF8Q8NHQ8 419 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 PPM1EQ8WY54 764 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 LPPQ93052 612 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 EPSTI1Q96J88 318 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 CLIC6Q96NY7 704 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 BLOC1S4Q9NUP1 217 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 TFIP11Q9UBB9 837 aaKnown RBP17.03■□□□□ 0.32
COMMD4-212ENST00000565517 CCDC39Q9UFE4 941 aa17.03■□□□□ 0.32
COMMD4-212ENST00000565517 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
COMMD4-212ENST00000565517 TDRD15B5MCY1 1934 aaKnown RBP17.02■□□□□ 0.32
COMMD4-212ENST00000565517 REV3LO60673 3130 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 K7ERI5 159 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 SPTLC2O15270 562 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 GRM6O15303 877 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 B4GALT5O43286 388 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 PRKCBP05771 671 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 DDIT3P35638 169 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 NPTX2P47972 431 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 PEX3P56589 373 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 UBE3AQ05086 875 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 PRPF4BQ13523 1007 aaKnown RBP17.02■□□□□ 0.32
COMMD4-212ENST00000565517 BECN1Q14457 450 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 TIGD5Q53EQ6 642 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 ARSHQ5FYA8 562 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 NOMO2Q5JPE7 1267 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 USP49Q70CQ1 688 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 MICALL1Q8N3F8 863 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 KLHL23Q8NBE8 558 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 COLGALT1Q8NBJ5 622 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 SMG8Q8ND04 991 aaKnown RBP17.02■□□□□ 0.32
COMMD4-212ENST00000565517 SPPL3Q8TCT6 385 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 LRRC15Q8TF66 581 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 SPIRE2Q8WWL2 714 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 RAD54LQ92698 747 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 SYMPKQ92797 1274 aaKnown RBP17.02■□□□□ 0.32
COMMD4-212ENST00000565517 EIF2AQ9BY44 585 aaKnown RBP17.02■□□□□ 0.32
COMMD4-212ENST00000565517 TMEM134Q9H6X4 195 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 RSAD1Q9HA92 442 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 KANSL3Q9P2N6 904 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 STK17AQ9UEE5 414 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 ODF2LQ9ULJ1 636 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 IPPQ9Y573 584 aa17.02■□□□□ 0.32
COMMD4-212ENST00000565517 CCDC169A6NNP5 214 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 MEIS3P2A8K0S8 358 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 N4BP3O15049 544 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 ITGB1P05556 798 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 ITGA4P13612 1032 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 PLS3P13797 630 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 PKP1Q13835 747 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 SPECC1Q5M775 1068 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 FOXD4L5Q5VV16 416 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-212ENST00000565517 HACE1Q8IYU2 909 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 FOXD4L4Q8WXT5 416 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-212ENST00000565517 LARP4BQ92615 738 aaKnown RBP17.01■□□□□ 0.31
COMMD4-212ENST00000565517 ZNF558Q96NG5 402 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 TRIM6Q9C030 488 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-212ENST00000565517 ALG13Q9NP73 1137 aaKnown RBP17.01■□□□□ 0.31
COMMD4-212ENST00000565517 KMT5AQ9NQR1 393 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 ARHGAP28Q9P2N2 729 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 HCSTQ9UBK5 93 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 MYO7AQ13402 2215 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 ZMYM2Q9UBW7 1377 aa17.01■□□□□ 0.31
COMMD4-212ENST00000565517 INPPL1O15357 1258 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 PPM1AP35813 382 aa17■□□□□ 0.31
COMMD4-212ENST00000565517 SMTNP53814 917 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms