RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ERMNQ8TAM6 284 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 RSPH1Q8WYR4 309 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 EDAQ92838 391 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 CASP10Q92851 521 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 IGSF21Q96ID5 467 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 MFSD14AQ96MC6 490 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 MTMR9Q96QG7 549 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 NACC1Q96RE7 527 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 LLPHQ9BRT6 129 aaKnown RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 APOL6Q9BWW8 343 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 EMILIN2Q9BXX0 1053 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 TRIM6Q9C030 488 aaPredicted RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 POLR3FQ9H1D9 316 aaPredicted RBP7.13□□□□□ -1.27
TCF4-228ENST00000565393 RNF39Q9H2S5 420 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 TSHZ2Q9NRE2 1034 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 AGPAT5Q9NUQ2 364 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 PARP2Q9UGN5 583 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 HES2Q9Y543 173 aa7.13□□□□□ -1.27
TCF4-228ENST00000565393 COL4A6Q14031 1691 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 PTPRSQ13332 1948 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 ARHGEF35A5YM69 484 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 LRRIQ4A6NIV6 560 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 LOC730098B7Z3J9 87 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 WNT7AO00755 349 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 C2CD2LO14523 706 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 NRP1O14786 923 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 TSPAN1O60635 241 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 USO1O60763 962 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 WEE2P0C1S8 567 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 SPATA31C1P0DKV0 1188 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 CTSAP10619 480 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 NCLP19338 710 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 GLRA2P23416 452 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 ARL2P36404 184 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 RARRES1P49788 294 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 AFF1P51825 1210 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 HMGN5P82970 282 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 ITIH3Q06033 890 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 POU5F1BQ06416 359 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 CBX2Q14781 532 aaPredicted RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 PCBP1Q15365 356 aaKnown RBP eCLIP7.12□□□□□ -1.27
TCF4-228ENST00000565393 HERC4Q5GLZ8 1057 aaPredicted RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 RARS2Q5T160 578 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 KIAA1841Q6NSI8 718 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 KANK3Q6NY19 840 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 NOTUMQ6P988 496 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 SYCE2Q6PIF2 218 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 CABP7Q86V35 215 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 TMEM173Q86WV6 379 aaPredicted RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 CDR2LQ86X02 465 aaPredicted RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 HACE1Q8IYU2 909 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 C12orf76Q8N812 135 aaPredicted RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 SMG8Q8ND04 991 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 ASAP3Q8TDY4 903 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 PBXIP1Q96AQ6 731 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 RIPOR3Q96MK2 946 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 KLHL5Q96PQ7 755 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 GAD1Q99259 594 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 COLEC11Q9BWP8 271 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 EIF2AQ9BY44 585 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 CSRNP2Q9H175 543 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 TMEM60Q9H2L4 133 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 ADAM7Q9H2U9 754 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 FOXP1Q9H334 677 aaPredicted RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 TUFT1Q9NNX1 390 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 XPNPEP1Q9NQW7 623 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 MRPL17Q9NRX2 175 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 KLK14Q9P0G3 267 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 STK39Q9UEW8 545 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 NOL7Q9UMY1 257 aaKnown RBP7.12□□□□□ -1.27
TCF4-228ENST00000565393 NR2E1Q9Y466 385 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 IPPQ9Y573 584 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 HCFC2Q9Y5Z7 792 aa7.12□□□□□ -1.27
TCF4-228ENST00000565393 PRRC2BQ5JSZ5 2229 aaKnown RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 CNTNAP2Q9UHC6 1331 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 ARL5CA6NH57 179 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 POTEMA6NI47 508 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 MED24O75448 989 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 TADA2AO75478 443 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 NPTXRO95502 500 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 OR52Z1P0C646 297 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 MYBP10242 640 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 EPCAMP16422 314 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 ARF4P18085 180 aaPredicted RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 AKAP5P24588 427 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 PLA2G5P39877 138 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 CCT6AP40227 531 aaKnown RBP7.11□□□□□ -1.27
TCF4-228ENST00000565393 MLH1P40692 756 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 ZXDAP98168 799 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 MBTD1Q05BQ5 628 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 ST3GAL1Q11201 340 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 CAPSQ13938 189 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 KCNC3Q14003 757 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 TTC38Q5R3I4 469 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 MCTP1Q6DN14 999 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 TRIM67Q6ZTA4 783 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 HFE2Q6ZVN8 426 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 TAS1R1Q7RTX1 841 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 PPFIBP1Q86W92 1011 aa7.11□□□□□ -1.27
TCF4-228ENST00000565393 NOSTRINQ8IVI9 506 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms