RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 HOXA11P31270 313 aaPredicted RBP17.79■□□□□ 0.44
CDH11-210ENST00000564770 RNASELQ05823 741 aaKnown RBP17.79■□□□□ 0.44
CDH11-210ENST00000564770 SPIRE1Q08AE8 756 aa17.79■□□□□ 0.44
CDH11-210ENST00000564770 PPP4R3AQ6IN85 833 aa17.79■□□□□ 0.44
CDH11-210ENST00000564770 TMC5Q6UXY8 1006 aa17.79■□□□□ 0.44
CDH11-210ENST00000564770 TDRD5Q8NAT2 981 aaKnown RBP17.79■□□□□ 0.44
CDH11-210ENST00000564770 SLC7A3Q8WY07 619 aa17.79■□□□□ 0.44
CDH11-210ENST00000564770 CEP170P1Q96L14 293 aa17.79■□□□□ 0.44
CDH11-210ENST00000564770 FAM20AQ96MK3 541 aa17.79■□□□□ 0.44
CDH11-210ENST00000564770 JPH2Q9BR39 696 aaPredicted RBP17.79■□□□□ 0.44
CDH11-210ENST00000564770 RSAD1Q9HA92 442 aa17.79■□□□□ 0.44
CDH11-210ENST00000564770 DCHS1Q96JQ0 3298 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 DOCK8Q8NF50 2099 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 ZBTB39O15060 712 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 CCNT1O60563 726 aaKnown RBP17.78■□□□□ 0.44
CDH11-210ENST00000564770 P4HBP07237 508 aaKnown RBP17.78■□□□□ 0.44
CDH11-210ENST00000564770 SRGAP2CP0DJJ0 459 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 LAMTOR4Q0VGL1 99 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 EMC2Q15006 297 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 CPLX2Q6PUV4 134 aaKnown RBP17.78■□□□□ 0.44
CDH11-210ENST00000564770 PIK3AP1Q6ZUJ8 805 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 MRPL10Q7Z7H8 261 aaKnown RBP17.78■□□□□ 0.44
CDH11-210ENST00000564770 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
CDH11-210ENST00000564770 SLKQ9H2G2 1235 aaPredicted RBP17.78■□□□□ 0.44
CDH11-210ENST00000564770 MARCH5Q9NX47 278 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 RGL1Q9NZL6 768 aa17.78■□□□□ 0.44
CDH11-210ENST00000564770 MTCL1Q9Y4B5 1905 aaKnown RBP17.77■□□□□ 0.44
CDH11-210ENST00000564770 CTDNEP1O95476 244 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 POMCP01189 267 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 SSBP05455 408 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDH11-210ENST00000564770 CNPP09543 421 aaKnown RBP17.77■□□□□ 0.44
CDH11-210ENST00000564770 GCFC2P16383 781 aaKnown RBP17.77■□□□□ 0.44
CDH11-210ENST00000564770 YWHABP31946 246 aaKnown RBP17.77■□□□□ 0.44
CDH11-210ENST00000564770 CYP4A11Q02928 519 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 GIT2Q14161 759 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 BMS1Q14692 1282 aaKnown RBP17.77■□□□□ 0.44
CDH11-210ENST00000564770 NCAPH2Q6IBW4 605 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 C4orf19Q8IY42 314 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 UBALD2Q8IYN6 164 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 TMEM105Q8N8V8 129 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 SMG8Q8ND04 991 aaKnown RBP17.77■□□□□ 0.44
CDH11-210ENST00000564770 URGCPQ8TCY9 931 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 PGBD4Q96DM1 585 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 DYDC2Q96IM9 177 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 SFXN1Q9H9B4 322 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 XPNPEP1Q9NQW7 623 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 PDRG1Q9NUG6 133 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 DBR1Q9UK59 544 aaKnown RBP17.77■□□□□ 0.44
CDH11-210ENST00000564770 TPCN1Q9ULQ1 816 aa17.77■□□□□ 0.44
CDH11-210ENST00000564770 FRYLO94915 3013 aa17.77■□□□□ 0.43
CDH11-210ENST00000564770 CNTNAP2Q9UHC6 1331 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 CARNS1A5YM72 827 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 LILRB3O75022 631 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 RFC5P40937 340 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 CLCN4P51793 760 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 CTTNQ14247 550 aaKnown RBP17.76■□□□□ 0.43
CDH11-210ENST00000564770 EPHA7Q15375 998 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 SRGAP1Q7Z6B7 1085 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 FERMT3Q86UX7 667 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 CABP7Q86V35 215 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 ZDHHC14Q8IZN3 488 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 RNF149Q8NC42 400 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 KLHL5Q96PQ7 755 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 USTQ9Y2C2 406 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 PPME1Q9Y570 386 aa17.76■□□□□ 0.43
CDH11-210ENST00000564770 F8W810 466 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 H0Y858 1186 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 NRP1O14786 923 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 TBX3O15119 743 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 TSPAN1O60635 241 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 PFKFB2O60825 505 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 DKC1O60832 514 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDH11-210ENST00000564770 CDKL5O76039 1030 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 NCLP19338 710 aaKnown RBP17.75■□□□□ 0.43
CDH11-210ENST00000564770 NR5A1Q13285 461 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 ATAT1Q5SQI0 421 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 GPR149Q86SP6 731 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 TMEM87AQ8NBN3 555 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 TMEM175Q9BSA9 504 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 EIF2AQ9BY44 585 aaKnown RBP17.75■□□□□ 0.43
CDH11-210ENST00000564770 LIMD1Q9UGP4 676 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 PRG3Q9Y2Y8 225 aaPredicted RBP17.75■□□□□ 0.43
CDH11-210ENST00000564770 IPPQ9Y573 584 aa17.75■□□□□ 0.43
CDH11-210ENST00000564770 WNT7AO00755 349 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 GAS2O43903 313 aaKnown RBP17.74■□□□□ 0.43
CDH11-210ENST00000564770 EFEMP2O95967 443 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 XKR9Q5GH70 373 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 PPFIBP1Q86W92 1011 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 RNF168Q8IYW5 571 aaPredicted RBP17.74■□□□□ 0.43
CDH11-210ENST00000564770 CPB2Q96IY4 423 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 ZFP42Q96MM3 310 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 MTRQ99707 1265 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 HERC2P3Q9BVR0 1158 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 RNF39Q9H2S5 420 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 HES2Q9Y543 173 aa17.74■□□□□ 0.43
CDH11-210ENST00000564770 DMXL1Q9Y485 3027 aa17.73■□□□□ 0.43
CDH11-210ENST00000564770 C2CD2LO14523 706 aa17.73■□□□□ 0.43
CDH11-210ENST00000564770 INPPL1O15357 1258 aa17.73■□□□□ 0.43
CDH11-210ENST00000564770 GALR2O43603 387 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms