RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SLC18A3Q16572 532 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 MAP7D1Q3KQU3 841 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 TDRD12Q587J7 1177 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 KLHDC7AQ5VTJ3 777 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 DPY19L2P1Q6NXN4 242 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 MAMSTRQ6ZN01 415 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 WDR75Q8IWA0 830 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 SCYL3Q8IZE3 742 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 RDM1Q8NG50 284 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 C12orf42Q96LP6 360 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 FAM126AQ9BYI3 521 aaPredicted RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 ANKZF1Q9H8Y5 726 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 AGO4Q9HCK5 861 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 DMAC2Q9NW81 257 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 COL20A1Q9P218 1284 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 MYH10P35580 1976 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 BTNL10A8MVZ5 291 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 TLR2O60603 784 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 ZBTB7AO95365 584 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 UCHL3P15374 230 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 TCP1P17987 556 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 PON1P27169 355 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 GNA15P30679 374 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 SFNP31947 248 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 PRKCIP41743 596 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 RPS6P62753 249 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 MRPS9P82933 396 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 KLHL30Q0D2K2 578 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 MTMR1Q13613 665 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 WDR93Q6P2C0 686 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 APOBEC3FQ8IUX4 373 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 C4orf19Q8IY42 314 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 CPXCR1Q8N123 301 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 SH3TC2Q8TF17 1288 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 SLC35C1Q96A29 364 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 NOX5Q96PH1 765 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 CRACR2AQ9BSW2 395 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 NIF3L1Q9GZT8 377 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 ST6GALNAC4Q9H4F1 302 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 TMEM206Q9H813 350 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 RAVER2Q9HCJ3 691 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 CHST12Q9NRB3 414 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 WRAP73Q9P2S5 460 aaPredicted RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 RNF14Q9UBS8 474 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 FRMD4BQ9Y2L6 1034 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 PCDHGA11Q9Y5H2 935 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 PPP2R3BQ9Y5P8 575 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 DUSP10Q9Y6W6 482 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 RBBP6Q7Z6E9 1792 aaKnown RBP7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 MYH11P35749 1972 aa7.91□□□□□ -1.14
HERPUD1-209ENST00000564678 MACROD2A1Z1Q3 448 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 TARSL2A2RTX5 802 aaKnown RBP7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 VWA5AO00534 786 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 ENC1O14682 589 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 ATP2A1O14983 1001 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 ZBTB39O15060 712 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 GFPT2O94808 682 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 EGFRP00533 1210 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 NMT1P30419 496 aaKnown RBP7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 EIF1AXP47813 144 aaKnown RBP7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 JAK3P52333 1124 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 GABPB1Q06547 395 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 PGM5Q15124 567 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 ASIC2Q16515 512 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 LYPD8Q6UX82 237 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 RNF207Q6ZRF8 634 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 SAMD7Q7Z3H4 446 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 ZNF572Q7Z3I7 529 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 IRF2BP2Q7Z5L9 587 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 C12orf56Q8IXR9 622 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 FAM186BQ8IYM0 893 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 ZNF280CQ8ND82 737 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 TRERF1Q96PN7 1200 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 SPAG5Q96R06 1193 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 TAAR1Q96RJ0 339 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 IWS1Q96ST2 819 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 FAM129BQ96TA1 746 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 PDCD2LQ9BRP1 358 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 RPAP3Q9H6T3 665 aaPredicted RBP7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 GGT7Q9UJ14 662 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 SNX12Q9UMY4 172 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 ADAMTS5Q9UNA0 930 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 BCS1LQ9Y276 419 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 PRKAB1Q9Y478 270 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 ZHX2Q9Y6X8 837 aa7.9□□□□□ -1.14
HERPUD1-209ENST00000564678 PPP1R12AO14974 1030 aaPredicted RBP7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 CLIC2O15247 247 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 MAPK13O15264 365 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 ZBTB24O43167 697 aaPredicted RBP7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 DKC1O60832 514 aaKnown RBP eCLIP7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 HIP1RO75146 1068 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 PTPRAP18433 802 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 SLC9A1P19634 815 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 CASP4P49662 377 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 RARRES1P49788 294 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 GYS2P54840 703 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 KRT76Q01546 638 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 GFPT1Q06210 699 aaPredicted RBP7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 SPP2Q13103 211 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms