RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 EFCAB2Q5VUJ9 269 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 CEP85Q6P2H3 762 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 CD300LDQ6UXZ3 194 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 KIAA1328Q86T90 577 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 CCDC83Q8IWF9 413 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 NLGN4XQ8N0W4 816 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 PCDH19Q8TAB3 1148 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 BICD2Q8TD16 824 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 APPBP2Q92624 585 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 TSR2Q969E8 191 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 GPATCH3Q96I76 525 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 FAM210AQ96ND0 272 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 EIF3CQ99613 913 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 KRTAP4-12Q9BQ66 201 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 LLPHQ9BRT6 129 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 NAA15Q9BXJ9 866 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 UPF3BQ9BZI7 483 aaKnown RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 IRF2BPLQ9H1B7 796 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 TMX4Q9H1E5 349 aaPredicted RBP6.29□□□□□ -1.4
CHD9-210ENST00000564582 BATF3Q9NR55 127 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 HMG20BQ9P0W2 317 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 GGA2Q9UJY4 613 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 TNNQ9UQP3 1299 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 MTMR6Q9Y217 621 aa6.29□□□□□ -1.4
CHD9-210ENST00000564582 ABCA6Q8N139 1617 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 TTC21AQ8NDW8 1320 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 ABCA8O94911 1581 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 LOC102724159A0A0B4J2E5 919 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 GOLIM4O00461 696 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 SLC27A2O14975 620 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 STX10O60499 249 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 ERLIN2O94905 339 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 SRGAP2CP0DJJ0 459 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 COL6A2P12110 1019 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 PWP2Q15269 919 aaKnown RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 GPR19Q15760 415 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 HABP4Q5JVS0 413 aaKnown RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 LRCH2Q5VUJ6 765 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 CCDC70Q6NSX1 233 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 C16orf59Q7L2K0 433 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 BRAPQ7Z569 592 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 YTHDF3Q7Z739 585 aaKnown RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 LUZP1Q86V48 1076 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 CILP2Q8IUL8 1156 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 APLFQ8IW19 511 aaPredicted RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 CCAR1Q8IX12 1150 aaKnown RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 ARRDC4Q8NCT1 418 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 TTLL11Q8NHH1 800 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 SLC7A14Q8TBB6 771 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 MAGEC3Q8TD91 643 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 TCP11Q8WWU5 503 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 DACT3Q96B18 629 aaPredicted RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 CCDC34Q96HJ3 373 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 RNPC3Q96LT9 517 aaKnown RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 TTC14Q96N46 770 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 KRTAP9-2Q9BYQ4 174 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 C14orf93Q9H972 538 aaKnown RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 ZNF446Q9NWS9 450 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 HOOK1Q9UJC3 728 aaKnown RBP6.28□□□□□ -1.4
CHD9-210ENST00000564582 RAB21Q9UL25 225 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 ATP10BO94823 1461 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 CDC42BPBQ9Y5S2 1711 aa6.28□□□□□ -1.4
CHD9-210ENST00000564582 ARAP3Q8WWN8 1544 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 ESYT3A0FGR9 886 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
CHD9-210ENST00000564582 B4E1Z4 1266 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 CHUKO15111 745 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 NKRFO15226 690 aaKnown RBP eCLIP6.27□□□□□ -1.411e-8■□□□□ 9.7
CHD9-210ENST00000564582 SMARCA5O60264 1052 aaPredicted RBP6.27□□□□□ -1.41
CHD9-210ENST00000564582 KIAA0754O94854 1291 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 NPTXRO95502 500 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 ASMTLO95671 621 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 PYGMP11217 842 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 GJB2P29033 226 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 MNAT1P51948 309 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 EVCP57679 992 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 JAG1P78504 1218 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 CCZ1BP86790 482 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 CCZ1P86791 482 aaPredicted RBP6.27□□□□□ -1.41
CHD9-210ENST00000564582 MAP2K1Q02750 393 aaPredicted RBP6.27□□□□□ -1.41
CHD9-210ENST00000564582 IFFO1Q0D2I5 559 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 DCTN1Q14203 1278 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 CRYMQ14894 314 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 IQCB1Q15051 598 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.27□□□□□ -1.41
CHD9-210ENST00000564582 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 SIAH1Q8IUQ4 282 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 ELOA2Q8IYF1 753 aaPredicted RBP6.27□□□□□ -1.41
CHD9-210ENST00000564582 C17orf53Q8N3J3 647 aaPredicted RBP6.27□□□□□ -1.41
CHD9-210ENST00000564582 C3orf20Q8ND61 904 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 P3H4Q92791 437 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 GTF3C6Q969F1 213 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 SMARCE1Q969G3 411 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 CABS1Q96KC9 395 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 PPP1R13BQ96KQ4 1090 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 PAIP2Q9BPZ3 127 aaKnown RBP6.27□□□□□ -1.41
CHD9-210ENST00000564582 PDRG1Q9NUG6 133 aa6.27□□□□□ -1.41
CHD9-210ENST00000564582 BABAM1Q9NWV8 329 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms