RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 IGSF21Q96ID5 467 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 FOXP1Q9H334 677 aaPredicted RBP16.7■□□□□ 0.26
SPG7-210ENST00000564409 NRDE2Q9H7Z3 1164 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 MINDY3Q9H8M7 445 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 SH2B1Q9NRF2 756 aaPredicted RBP16.7■□□□□ 0.26
SPG7-210ENST00000564409 RAPGEFL1Q9UHV5 662 aa16.7■□□□□ 0.26
SPG7-210ENST00000564409 DTNBO60941 627 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 CXCL14O95715 111 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 GALTP07902 379 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 NCLP19338 710 aaKnown RBP16.69■□□□□ 0.26
SPG7-210ENST00000564409 ITIH3Q06033 890 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 NOTUMQ6P988 496 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 AGMOQ6ZNB7 445 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 TMEM87AQ8NBN3 555 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 C8orf76Q96K31 380 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 FAM193BQ96PV7 902 aaPredicted RBP16.69■□□□□ 0.26
SPG7-210ENST00000564409 TMEM175Q9BSA9 504 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 S1PR5Q9H228 398 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 KCNH6Q9H252 994 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 XPNPEP1Q9NQW7 623 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 INPP5FQ9Y2H2 1132 aa16.69■□□□□ 0.26
SPG7-210ENST00000564409 ZBTB39O15060 712 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 INPPL1O15357 1258 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 SEC24BO95487 1268 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 ALDH2P05091 517 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 CTSAP10619 480 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 ARL2P36404 184 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 RARRES1P49788 294 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 UBXN11Q5T124 520 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 CES5AQ6NT32 575 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 PPFIBP1Q86W92 1011 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 HACE1Q8IYU2 909 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 MCPH1Q8NEM0 835 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 ERMNQ8TAM6 284 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 EDAQ92838 391 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 NECTIN4Q96NY8 510 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 POLR3CQ9BUI4 534 aaPredicted RBP16.68■□□□□ 0.26
SPG7-210ENST00000564409 ZBP1Q9H171 429 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 DZANK1Q9NVP4 752 aa16.68■□□□□ 0.26
SPG7-210ENST00000564409 DBR1Q9UK59 544 aaKnown RBP16.68■□□□□ 0.26
SPG7-210ENST00000564409 ZMYM2Q9UBW7 1377 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 TDRD15B5MCY1 1934 aaKnown RBP16.67■□□□□ 0.26
SPG7-210ENST00000564409 NT5C1B-RDH14C9J2C7 533 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 INO80B-WBP1J3KQ70 363 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 MUTP22033 750 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 MCM7P33993 719 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 TRAPPC10P48553 1259 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
SPG7-210ENST00000564409 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
SPG7-210ENST00000564409 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 SYCE2Q6PIF2 218 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 FBXO18Q8NFZ0 1043 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 NACC1Q96RE7 527 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 CSRNP2Q9H175 543 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
SPG7-210ENST00000564409 MUTYHQ9UIF7 546 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 HCFC2Q9Y5Z7 792 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 C5orf42Q9H799 3197 aa16.67■□□□□ 0.26
SPG7-210ENST00000564409 MEIS3P2A8K0S8 358 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 TSPAN1O60635 241 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 CLASP2O75122 1294 aaKnown RBP16.66■□□□□ 0.26
SPG7-210ENST00000564409 TECTAO75443 2155 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 ITGA4P13612 1032 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 SLC11A1P49279 550 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 CAPSQ13938 189 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 LONRF3Q496Y0 759 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 CCDC83Q8IWF9 413 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 PRIMPOLQ96LW4 560 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 MFSD14AQ96MC6 490 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 ADAM7Q9H2U9 754 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 SSX2IPQ9Y2D8 614 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 FAN1Q9Y2M0 1017 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 NR2E1Q9Y466 385 aa16.66■□□□□ 0.26
SPG7-210ENST00000564409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.65■□□□□ 0.26
SPG7-210ENST00000564409 POTEMA6NI47 508 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 WNT7AO00755 349 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 NR1I2O75469 434 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 SPATA31C1P0DKV0 1188 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 RPA1P27694 616 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 MTHFRP42898 656 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 FOSBP53539 338 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 MBTD1Q05BQ5 628 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 BMP8AQ7Z5Y6 402 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 CATSPER3Q86XQ3 398 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 ZNF280BQ86YH2 543 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 SMG8Q8ND04 991 aaKnown RBP16.65■□□□□ 0.26
SPG7-210ENST00000564409 PIGOQ8TEQ8 1089 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 RIPOR3Q96MK2 946 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 EMILIN2Q9BXX0 1053 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 TRIM6Q9C030 488 aaPredicted RBP16.65■□□□□ 0.26
SPG7-210ENST00000564409 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 TMEM60Q9H2L4 133 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 DNAJB4Q9UDY4 337 aa16.65■□□□□ 0.26
SPG7-210ENST00000564409 NOL7Q9UMY1 257 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms