RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 SMC1AQ14683 1233 aaKnown RBP19.3■□□□□ 0.68
GDE1-203ENST00000564172 VWA3BQ502W6 1294 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 CCDC150Q8NCX0 1101 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 IFT74Q96LB3 600 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 ARHGAP39Q9C0H5 1083 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 NDST4Q9H3R1 872 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 AGPAT3Q9NRZ7 376 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 ITIH6Q6UXX5 1313 aa19.3■□□□□ 0.68
GDE1-203ENST00000564172 A0A1W2PQC6 194 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 ZBTB42B2RXF5 422 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 HBP1O60381 514 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
GDE1-203ENST00000564172 ARL2P36404 184 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 ERCC6LQ2NKX8 1250 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 OR6J1Q8NGC5 347 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 RNPEPQ9H4A4 650 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 AKAP3O75969 853 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 ADGRA3Q8IWK6 1321 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 TRIM59Q8IWR1 403 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 TBX20Q9UMR3 447 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 TRPC6Q9Y210 931 aa19.29■□□□□ 0.68
GDE1-203ENST00000564172 DENND3A2RUS2 1198 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 CASP4P49662 377 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 HVCN1Q96D96 273 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 C16orf70Q9BSU1 422 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 DMAC2Q9NW81 257 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 GNEQ9Y223 722 aaKnown RBP19.28■□□□□ 0.68
GDE1-203ENST00000564172 TBC1D8O95759 1140 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 HOXD8P13378 290 aaPredicted RBP19.28■□□□□ 0.68
GDE1-203ENST00000564172 GLRA2P23416 452 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 LMAN1P49257 510 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 GOLGA8FQ08AF8 430 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 GOLGA8DPQ0D2H9 430 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 FRMD5Q7Z6J6 570 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 TADA2BQ86TJ2 420 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 ARHGAP28Q9P2N2 729 aa19.28■□□□□ 0.68
GDE1-203ENST00000564172 MMP3P08254 477 aa19.27■□□□□ 0.68
GDE1-203ENST00000564172 XRCC5P13010 732 aaKnown RBP19.27■□□□□ 0.68
GDE1-203ENST00000564172 RBL2Q08999 1139 aa19.27■□□□□ 0.68
GDE1-203ENST00000564172 FKBP15Q5T1M5 1219 aa19.27■□□□□ 0.68
GDE1-203ENST00000564172 SLC9A9Q8IVB4 645 aa19.27■□□□□ 0.68
GDE1-203ENST00000564172 MAP4K3Q8IVH8 894 aa19.27■□□□□ 0.68
GDE1-203ENST00000564172 ASAP3Q8TDY4 903 aa19.27■□□□□ 0.68
GDE1-203ENST00000564172 MIEF2Q96C03 454 aa19.27■□□□□ 0.68
GDE1-203ENST00000564172 ARMCX3Q9UH62 379 aaPredicted RBP19.27■□□□□ 0.68
GDE1-203ENST00000564172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.27■□□□□ 0.68
GDE1-203ENST00000564172 IGKV6-21A0A0C4DH24 114 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 SLC16A3O15427 465 aaKnown RBP19.27■□□□□ 0.67
GDE1-203ENST00000564172 DYNC1LI2O43237 492 aaPredicted RBP19.27■□□□□ 0.67
GDE1-203ENST00000564172 ZNF286BP0CG31 522 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 CCZ1BP86790 482 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 CCZ1P86791 482 aaPredicted RBP19.27■□□□□ 0.67
GDE1-203ENST00000564172 DRP2Q13474 957 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 PPFIBP1Q86W92 1011 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 EXOC8Q8IYI6 725 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 TC2NQ8N9U0 490 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 ERGIC2Q96RQ1 377 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 GABRQQ9UN88 632 aa19.27■□□□□ 0.67
GDE1-203ENST00000564172 TISP43B9A030 160 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 GYPCP04921 128 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 EPB41P11171 864 aaKnown RBP19.26■□□□□ 0.67
GDE1-203ENST00000564172 NAMPTP43490 491 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 ADKP55263 362 aaKnown RBP19.26■□□□□ 0.67
GDE1-203ENST00000564172 MYBPC2Q14324 1141 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 DGKDQ16760 1214 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 ARHGAP29Q52LW3 1261 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 ZC3H12AQ5D1E8 599 aaKnown RBP19.26■□□□□ 0.67
GDE1-203ENST00000564172 TMEM174Q8WUU8 243 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 TRAPPC12Q8WVT3 735 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 FAXDC2Q96IV6 333 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 METTL14Q9HCE5 456 aaKnown RBP19.26■□□□□ 0.67
GDE1-203ENST00000564172 EXOC7Q9UPT5 735 aa19.26■□□□□ 0.67
GDE1-203ENST00000564172 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.26■□□□□ 0.67
GDE1-203ENST00000564172 H0YCG3 227 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 H3BRB1 525 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 GAS2O43903 313 aaKnown RBP19.25■□□□□ 0.67
GDE1-203ENST00000564172 INSRRP14616 1297 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 PSMC2P35998 433 aaKnown RBP19.25■□□□□ 0.67
GDE1-203ENST00000564172 FLT3LGP49771 235 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 CYP2J2P51589 502 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 SNRPFP62306 86 aaKnown RBP19.25■□□□□ 0.67
GDE1-203ENST00000564172 MKRN4PQ13434 485 aaPredicted RBP19.25■□□□□ 0.67
GDE1-203ENST00000564172 IER5Q5VY09 327 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 CPLX3Q8WVH0 158 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 KCNN1Q92952 543 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 MKNK1Q9BUB5 465 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 TUT1Q9H6E5 874 aaKnown RBP19.25■□□□□ 0.67
GDE1-203ENST00000564172 SUGCTQ9HAC7 445 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 A6NJR5 290 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 SKILP12757 684 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 CASP14P31944 242 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 SP3Q02447 781 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 TAS1R3Q7RTX0 852 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 FMNL3Q8IVF7 1028 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 C12orf56Q8IXR9 622 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 PRPF31Q8WWY3 499 aaKnown RBP19.25■□□□□ 0.67
GDE1-203ENST00000564172 JPH2Q9BR39 696 aaPredicted RBP19.25■□□□□ 0.67
GDE1-203ENST00000564172 FAM184BQ9ULE4 1060 aa19.25■□□□□ 0.67
GDE1-203ENST00000564172 AKR1B15C9JRZ8 316 aaPredicted RBP19.24■□□□□ 0.67
GDE1-203ENST00000564172 ABCD1P33897 745 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms