RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 TOP1MTQ969P6 601 aa21.56■■□□□ 1.04
SLX1A-204ENST00000563995 SAMD11Q96NU1 681 aa21.56■■□□□ 1.04
SLX1A-204ENST00000563995 ERVK-5Q9HDB9 667 aa21.56■■□□□ 1.04
SLX1A-204ENST00000563995 KIAA1671Q9BY89 1806 aa21.56■■□□□ 1.04
SLX1A-204ENST00000563995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.55■■□□□ 1.04
SLX1A-204ENST00000563995 GPR182O15218 404 aa21.55■■□□□ 1.04
SLX1A-204ENST00000563995 HIP1RO75146 1068 aa21.55■■□□□ 1.04
SLX1A-204ENST00000563995 CMA1P23946 247 aa21.55■■□□□ 1.04
SLX1A-204ENST00000563995 POU5F1BQ06416 359 aa21.55■■□□□ 1.04
SLX1A-204ENST00000563995 DHX8Q14562 1220 aaKnown RBP21.55■■□□□ 1.04
SLX1A-204ENST00000563995 E2F4Q16254 413 aa21.55■■□□□ 1.04
SLX1A-204ENST00000563995 ARSHQ5FYA8 562 aa21.55■■□□□ 1.04
SLX1A-204ENST00000563995 PTCRAQ6ISU1 281 aaPredicted RBP21.55■■□□□ 1.04
SLX1A-204ENST00000563995 DRC1Q96MC2 740 aa21.55■■□□□ 1.04
SLX1A-204ENST00000563995 INO80BQ9C086 356 aaPredicted RBP21.55■■□□□ 1.04
SLX1A-204ENST00000563995 ST3GAL5Q9UNP4 418 aa21.55■■□□□ 1.04
SLX1A-204ENST00000563995 A0A1W2PQ27 194 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 A0A1W2PQ64 194 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 A0A1W2PQD8 194 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 GRXCR2A6NFK2 248 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 H3BNC9 293 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 PHKA2P46019 1235 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 PTENP60484 403 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 NFX1Q12986 1120 aaKnown RBP21.54■■□□□ 1.04
SLX1A-204ENST00000563995 MAPK7Q13164 816 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 COL19A1Q14993 1142 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 PTPROQ16827 1216 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 TIGD5Q53EQ6 642 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 FAM43BQ6ZT52 329 aaPredicted RBP21.54■■□□□ 1.04
SLX1A-204ENST00000563995 SRGAP1Q7Z6B7 1085 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 IFNLR1Q8IU57 520 aaPredicted RBP21.54■■□□□ 1.04
SLX1A-204ENST00000563995 DAW1Q8N136 415 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 BSNDQ8WZ55 320 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 PHOX2BQ99453 314 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 NFKBIZQ9BYH8 718 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 POLD4Q9HCU8 107 aa21.54■■□□□ 1.04
SLX1A-204ENST00000563995 TTC3P53804 2025 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 CSDE1O75534 798 aaKnown RBP21.53■■□□□ 1.04
SLX1A-204ENST00000563995 SFPQP23246 707 aaKnown RBP eCLIP21.53■■□□□ 1.04
SLX1A-204ENST00000563995 RAD51AP2Q09MP3 1159 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 PPP2R5AQ15172 486 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 SV2BQ7L1I2 683 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 IQUBQ8NA54 791 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 DHX58Q96C10 678 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 IFT74Q96LB3 600 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 YME1L1Q96TA2 773 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 FTHL17Q9BXU8 183 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 TMX1Q9H3N1 280 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 CUEDC2Q9H467 287 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 KCNH3Q9ULD8 1083 aa21.53■■□□□ 1.04
SLX1A-204ENST00000563995 NPHP3-ACAD11A0A0J9YXS1 232 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 LRRIQ4A6NIV6 560 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 POLR2DO15514 142 aaKnown RBP21.52■■□□□ 1.04
SLX1A-204ENST00000563995 DCXO43602 365 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 PFKFB1P16118 471 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 FGFR4P22455 802 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 NAMPTP43490 491 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 PUS10Q3MIT2 529 aaKnown RBP21.52■■□□□ 1.04
SLX1A-204ENST00000563995 CDCA2Q69YH5 1023 aaPredicted RBP21.52■■□□□ 1.04
SLX1A-204ENST00000563995 REEP2Q9BRK0 252 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 PYM1Q9BRP8 204 aaKnown RBP21.52■■□□□ 1.04
SLX1A-204ENST00000563995 MINDY3Q9H8M7 445 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 C17orf75Q9HAS0 396 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 ODF2LQ9ULJ1 636 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 HPSEQ9Y251 543 aa21.52■■□□□ 1.04
SLX1A-204ENST00000563995 FAM237AA0A1B0GTK4 181 aa21.51■■□□□ 1.03
SLX1A-204ENST00000563995 A0A1B0GVL5 298 aa21.51■■□□□ 1.03
SLX1A-204ENST00000563995 H3BQ06 376 aaPredicted RBP21.51■■□□□ 1.03
SLX1A-204ENST00000563995 CACNB1Q02641 598 aaPredicted RBP21.51■■□□□ 1.03
SLX1A-204ENST00000563995 GPM6BQ13491 265 aa21.51■■□□□ 1.03
SLX1A-204ENST00000563995 GIT2Q14161 759 aa21.51■■□□□ 1.03
SLX1A-204ENST00000563995 TCEAL5Q5H9L2 206 aa21.51■■□□□ 1.03
SLX1A-204ENST00000563995 TMEM192Q8IY95 271 aa21.51■■□□□ 1.03
SLX1A-204ENST00000563995 LINC01599Q8WXQ3 324 aa21.51■■□□□ 1.03
SLX1A-204ENST00000563995 MRPS27Q92552 414 aaKnown RBP21.51■■□□□ 1.03
SLX1A-204ENST00000563995 PABPC5Q96DU9 382 aaKnown RBP21.51■■□□□ 1.03
SLX1A-204ENST00000563995 MYMKA6NI61 221 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 UPP2O95045 317 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 KRT18P05783 430 aaKnown RBP21.5■■□□□ 1.03
SLX1A-204ENST00000563995 MBTD1Q05BQ5 628 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 DMP1Q13316 513 aaPredicted RBP21.5■■□□□ 1.03
SLX1A-204ENST00000563995 PCBP1Q15365 356 aaKnown RBP eCLIP21.5■■□□□ 1.03
SLX1A-204ENST00000563995 CATSPER4Q7RTX7 472 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 ZBTB8OSQ8IWT0 167 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 FSIP1Q8NA03 581 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 C2orf40Q9H1Z8 148 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 TNMDQ9H2S6 317 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 NSUN3Q9H649 340 aaKnown RBP21.5■■□□□ 1.03
SLX1A-204ENST00000563995 MAGEF1Q9HAY2 307 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 ZNF318Q5VUA4 2279 aa21.5■■□□□ 1.03
SLX1A-204ENST00000563995 SFI1A8K8P3 1242 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 ENPP3O14638 875 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 MGEA5O60502 916 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 LINC00271P0C7V0 271 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 PLS3P13797 630 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 NPTX2P47972 431 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 ZNF131P52739 623 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 PEX3P56589 373 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 DSC3Q14574 896 aa21.49■■□□□ 1.03
SLX1A-204ENST00000563995 RTN4RL1Q86UN2 441 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms