RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 GALTP07902 379 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 CTSAP10619 480 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 ITGA4P13612 1032 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 HOXD11P31277 338 aaPredicted RBP10.64□□□□□ -0.71
CLN6-203ENST00000563917 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
CLN6-203ENST00000563917 NR5A1Q13285 461 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 GNL2Q13823 731 aaKnown RBP10.64□□□□□ -0.71
CLN6-203ENST00000563917 ATAT1Q5SQI0 421 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 HFE2Q6ZVN8 426 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 DDX53Q86TM3 631 aaKnown RBP10.64□□□□□ -0.71
CLN6-203ENST00000563917 FERMT3Q86UX7 667 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 CABP7Q86V35 215 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 DIS3L2Q8IYB7 885 aaKnown RBP10.64□□□□□ -0.71
CLN6-203ENST00000563917 NECAB1Q8N987 351 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 VN1R2Q8NFZ6 395 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 GTF3C6Q969F1 213 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 CCDC51Q96ER9 411 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 EIF2AK1Q9BQI3 630 aaKnown RBP10.64□□□□□ -0.71
CLN6-203ENST00000563917 ADAM7Q9H2U9 754 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 NRDE2Q9H7Z3 1164 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 TTC12Q9H892 705 aaPredicted RBP10.64□□□□□ -0.71
CLN6-203ENST00000563917 IFT122Q9HBG6 1241 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 GJB4Q9NTQ9 266 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 ANKEF1Q9NU02 776 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 DPP7Q9UHL4 492 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 SSX2IPQ9Y2D8 614 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 FAN1Q9Y2M0 1017 aa10.64□□□□□ -0.71
CLN6-203ENST00000563917 CLASP2O75122 1294 aaKnown RBP10.63□□□□□ -0.71
CLN6-203ENST00000563917 KLRC2P26717 231 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 TXKP42681 527 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 FOSBP53539 338 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 SIGLEC14Q08ET2 396 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 ME3Q16798 604 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 SYCE2Q6PIF2 218 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 BMP8AQ7Z5Y6 402 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 ERMNQ8TAM6 284 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 TMEM175Q9BSA9 504 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 ZBP1Q9H171 429 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 S1PR5Q9H228 398 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 MRPL17Q9NRX2 175 aaKnown RBP10.63□□□□□ -0.71
CLN6-203ENST00000563917 DBR1Q9UK59 544 aaKnown RBP10.63□□□□□ -0.71
CLN6-203ENST00000563917 IRAK3Q9Y616 596 aa10.63□□□□□ -0.71
CLN6-203ENST00000563917 BTBD18B2RXH4 712 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 SLITRK3O94933 977 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 LYPLA2O95372 231 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 CTDNEP1O95476 244 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 POMCP01189 267 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 URODP06132 367 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 XRCC6P12956 609 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLN6-203ENST00000563917 NCLP19338 710 aaKnown RBP10.62□□□□□ -0.71
CLN6-203ENST00000563917 ATP2B1P20020 1258 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 SP100P23497 879 aaPredicted RBP10.62□□□□□ -0.71
CLN6-203ENST00000563917 OR1G1P47890 313 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 SLC11A1P49279 550 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 PTENP60484 403 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 POU5F1BQ06416 359 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 KCNC3Q14003 757 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 PTPN21Q16825 1174 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 RARS2Q5T160 578 aaKnown RBP10.62□□□□□ -0.71
CLN6-203ENST00000563917 KIAA1841Q6NSI8 718 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 MRPL10Q7Z7H8 261 aaKnown RBP10.62□□□□□ -0.71
CLN6-203ENST00000563917 ZBTB8OSQ8IWT0 167 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 FBXL6Q8N531 539 aa10.62□□□□□ -0.71
CLN6-203ENST00000563917 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
CLN6-203ENST00000563917 TDRD5Q8NAT2 981 aaKnown RBP10.62□□□□□ -0.71
CLN6-203ENST00000563917 ACSF2Q96CM8 615 aaPredicted RBP10.62□□□□□ -0.71
CLN6-203ENST00000563917 WRAP73Q9P2S5 460 aaPredicted RBP10.62□□□□□ -0.71
CLN6-203ENST00000563917 FAM205CA6NFA0 338 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 MEIS3P2A8K0S8 358 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 DTNBO60941 627 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 SSBP05455 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLN6-203ENST00000563917 ADH1AP07327 375 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 MCM7P33993 719 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 SPIRE1Q08AE8 756 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 MTMR3Q13615 1198 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 EARS2Q5JPH6 523 aaKnown RBP10.61□□□□□ -0.71
CLN6-203ENST00000563917 AGMOQ6ZNB7 445 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 ALYREFQ86V81 257 aaKnown RBP10.61□□□□□ -0.71
CLN6-203ENST00000563917 ZNF280BQ86YH2 543 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 UBALD2Q8IYN6 164 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 FAM184AQ8NB25 1140 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 NSUN7Q8NE18 718 aaKnown RBP10.61□□□□□ -0.71
CLN6-203ENST00000563917 MCPH1Q8NEM0 835 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 AUTS2Q8WXX7 1259 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 C8orf76Q96K31 380 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 FBXL18Q96ME1 805 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 COLEC11Q9BWP8 271 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 CSRNP2Q9H175 543 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 IRF2BPLQ9H1B7 796 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 MINDY3Q9H8M7 445 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 SFXN1Q9H9B4 322 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 DNAJB4Q9UDY4 337 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 SORCS3Q9UPU3 1222 aa10.61□□□□□ -0.71
CLN6-203ENST00000563917 PRG3Q9Y2Y8 225 aaPredicted RBP10.61□□□□□ -0.71
CLN6-203ENST00000563917 LRRIQ4A6NIV6 560 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 C2CD2LO14523 706 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 NRP1O14786 923 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 ZBTB39O15060 712 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms