RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 TRAIPQ9BWF2 469 aa7.72□□□□□ -1.17
CDH11-208ENST00000563492 EIF2AQ9BY44 585 aaKnown RBP7.72□□□□□ -1.17
CDH11-208ENST00000563492 ZBP1Q9H171 429 aa7.72□□□□□ -1.17
CDH11-208ENST00000563492 TMEM60Q9H2L4 133 aa7.72□□□□□ -1.17
CDH11-208ENST00000563492 AGPAT5Q9NUQ2 364 aa7.72□□□□□ -1.17
CDH11-208ENST00000563492 MIOSQ9NXC5 875 aa7.72□□□□□ -1.17
CDH11-208ENST00000563492 USP20Q9Y2K6 914 aa7.72□□□□□ -1.17
CDH11-208ENST00000563492 FNDC1Q4ZHG4 1894 aaPredicted RBP7.72□□□□□ -1.17
CDH11-208ENST00000563492 STK36Q9NRP7 1315 aa7.72□□□□□ -1.17
CDH11-208ENST00000563492 ZDBF2Q9HCK1 2354 aa7.71□□□□□ -1.17
CDH11-208ENST00000563492 TTLL13PA6NNM8 815 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 NRP1O14786 923 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 B4GALT5O43286 388 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 TSPAN1O60635 241 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 CDKL5O76039 1030 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 ASGR2P07307 311 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 CTSAP10619 480 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 GCFC2P16383 781 aaKnown RBP7.71□□□□□ -1.18
CDH11-208ENST00000563492 ATP2B1P20020 1258 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 KRT2P35908 639 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 TXKP42681 527 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 CDC42EP1Q00587 391 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 RNASELQ05823 741 aaKnown RBP7.71□□□□□ -1.18
CDH11-208ENST00000563492 PTPN14Q15678 1187 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 TMC5Q6UXY8 1006 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 MAEAQ7L5Y9 396 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 DDX53Q86TM3 631 aaKnown RBP7.71□□□□□ -1.18
CDH11-208ENST00000563492 PIAS4Q8N2W9 510 aaPredicted RBP7.71□□□□□ -1.18
CDH11-208ENST00000563492 PSPC1Q8WXF1 523 aaKnown RBP7.71□□□□□ -1.18
CDH11-208ENST00000563492 GTF3C6Q969F1 213 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 B3GALT6Q96L58 329 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 APOL6Q9BWW8 343 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 MRPL9Q9BYD2 267 aaKnown RBP7.71□□□□□ -1.18
CDH11-208ENST00000563492 INO80BQ9C086 356 aaPredicted RBP7.71□□□□□ -1.18
CDH11-208ENST00000563492 ADAM7Q9H2U9 754 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 ZSWIM4Q9H7M6 989 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 POLD4Q9HCU8 107 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 GPRC5CQ9NQ84 441 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 CACNG4Q9UBN1 327 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 LIMD1Q9UGP4 676 aa7.71□□□□□ -1.18
CDH11-208ENST00000563492 POTEMA6NI47 508 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 C2CD2LO14523 706 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 TBX3O15119 743 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 LILRB3O75022 631 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 BRD1O95696 1058 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 CNPP09543 421 aaKnown RBP7.7□□□□□ -1.18
CDH11-208ENST00000563492 SPATA31D3P0C874 917 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 SPATA31C1P0DKV0 1188 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 HOXB8P17481 243 aaPredicted RBP7.7□□□□□ -1.18
CDH11-208ENST00000563492 XBP1P17861 261 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 GLRA2P23416 452 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 AKAP5P24588 427 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 ARL2P36404 184 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 MLH1P40692 756 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 RFC5P40937 340 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 MRE11P49959 708 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 NEK4P51957 841 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 PTENP60484 403 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 MBTD1Q05BQ5 628 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 TCF15Q12870 199 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 CAPSQ13938 189 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 CALCRLQ16602 461 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 AMHR2Q16671 573 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 PTPN21Q16825 1174 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 SPATA31D4Q6ZUB0 917 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 OTUD6AQ7L8S5 288 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 BMP8AQ7Z5Y6 402 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 SRGAP1Q7Z6B7 1085 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 DIS3L2Q8IYB7 885 aaKnown RBP7.7□□□□□ -1.18
CDH11-208ENST00000563492 FAM177A1Q8N128 213 aaPredicted RBP7.7□□□□□ -1.18
CDH11-208ENST00000563492 FBXL6Q8N531 539 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 KREMEN2Q8NCW0 462 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 CASP10Q92851 521 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 MFSD14AQ96MC6 490 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 KLHL5Q96PQ7 755 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 MTMR9Q96QG7 549 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 GAD1Q99259 594 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 CXCL16Q9H2A7 254 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 TTC12Q9H892 705 aaPredicted RBP7.7□□□□□ -1.18
CDH11-208ENST00000563492 RSAD1Q9HA92 442 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 FAM86C1Q9NVL1 165 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 MARCH5Q9NX47 278 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 KLK14Q9P0G3 267 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 PCDHA12Q9UN75 941 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 PRG3Q9Y2Y8 225 aaPredicted RBP7.7□□□□□ -1.18
CDH11-208ENST00000563492 IPPQ9Y573 584 aa7.7□□□□□ -1.18
CDH11-208ENST00000563492 ARL5CA6NH57 179 aa7.69□□□□□ -1.18
CDH11-208ENST00000563492 INO80B-WBP1J3KQ70 363 aa7.69□□□□□ -1.18
CDH11-208ENST00000563492 DKC1O60832 514 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDH11-208ENST00000563492 MED24O75448 989 aa7.69□□□□□ -1.18
CDH11-208ENST00000563492 BAG4O95429 457 aaKnown RBP7.69□□□□□ -1.18
CDH11-208ENST00000563492 ALDH2P05091 517 aa7.69□□□□□ -1.18
CDH11-208ENST00000563492 SRGAP2BP0DMP2 458 aa7.69□□□□□ -1.18
CDH11-208ENST00000563492 SKIP12755 728 aa7.69□□□□□ -1.18
CDH11-208ENST00000563492 ITGA4P13612 1032 aa7.69□□□□□ -1.18
CDH11-208ENST00000563492 ARF4P18085 180 aaPredicted RBP7.69□□□□□ -1.18
CDH11-208ENST00000563492 NCLP19338 710 aaKnown RBP7.69□□□□□ -1.18
CDH11-208ENST00000563492 IGFBP6P24592 240 aaPredicted RBP7.69□□□□□ -1.18
CDH11-208ENST00000563492 KLRC2P26717 231 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms