RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 GAS2O43903 313 aaKnown RBP23.4■■□□□ 1.34
CHD9-208ENST00000563410 DDHD2O94830 711 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 SLITRK3O94933 977 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 SP100P23497 879 aaPredicted RBP23.4■■□□□ 1.34
CHD9-208ENST00000563410 KRT2P35908 639 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 RNASELQ05823 741 aaKnown RBP23.4■■□□□ 1.34
CHD9-208ENST00000563410 ITIH3Q06033 890 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 SIGLEC14Q08ET2 396 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 XKR9Q5GH70 373 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 OTUD6AQ7L8S5 288 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 FERMT3Q86UX7 667 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 GBP3Q9H0R5 595 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 POMKQ9H5K3 350 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 XPNPEP1Q9NQW7 623 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 DENND4AQ7Z401 1863 aa23.4■■□□□ 1.34
CHD9-208ENST00000563410 ASAP2O43150 1006 aa23.39■■□□□ 1.33
CHD9-208ENST00000563410 BAG4O95429 457 aaKnown RBP23.39■■□□□ 1.33
CHD9-208ENST00000563410 BMS1Q14692 1282 aaKnown RBP23.39■■□□□ 1.33
CHD9-208ENST00000563410 PTPN21Q16825 1174 aa23.39■■□□□ 1.33
CHD9-208ENST00000563410 RNF149Q8NC42 400 aa23.39■■□□□ 1.33
CHD9-208ENST00000563410 TCP11Q8WWU5 503 aa23.39■■□□□ 1.33
CHD9-208ENST00000563410 GTF3C6Q969F1 213 aa23.39■■□□□ 1.33
CHD9-208ENST00000563410 ASIC4Q96FT7 647 aa23.39■■□□□ 1.33
CHD9-208ENST00000563410 RSAD1Q9HA92 442 aa23.39■■□□□ 1.33
CHD9-208ENST00000563410 C2orf16Q68DN1 1984 aa23.39■■□□□ 1.33
CHD9-208ENST00000563410 WNT7AO00755 349 aa23.38■■□□□ 1.33
CHD9-208ENST00000563410 EPCAMP16422 314 aa23.38■■□□□ 1.33
CHD9-208ENST00000563410 CES5AQ6NT32 575 aa23.38■■□□□ 1.33
CHD9-208ENST00000563410 TPH2Q8IWU9 490 aa23.38■■□□□ 1.33
CHD9-208ENST00000563410 NSUN7Q8NE18 718 aaKnown RBP23.38■■□□□ 1.33
CHD9-208ENST00000563410 SLC22A17Q8WUG5 538 aa23.38■■□□□ 1.33
CHD9-208ENST00000563410 MTRQ99707 1265 aa23.38■■□□□ 1.33
CHD9-208ENST00000563410 HSD17B14Q9BPX1 270 aa23.38■■□□□ 1.33
CHD9-208ENST00000563410 EIF2AK1Q9BQI3 630 aaKnown RBP23.38■■□□□ 1.33
CHD9-208ENST00000563410 CNTNAP2Q9UHC6 1331 aa23.37■■□□□ 1.33
CHD9-208ENST00000563410 NCLP19338 710 aaKnown RBP23.37■■□□□ 1.33
CHD9-208ENST00000563410 GIT2Q14161 759 aa23.37■■□□□ 1.33
CHD9-208ENST00000563410 IER5LQ5T953 404 aa23.37■■□□□ 1.33
CHD9-208ENST00000563410 KANK3Q6NY19 840 aa23.37■■□□□ 1.33
CHD9-208ENST00000563410 C12orf76Q8N812 135 aaPredicted RBP23.37■■□□□ 1.33
CHD9-208ENST00000563410 SMG8Q8ND04 991 aaKnown RBP23.37■■□□□ 1.33
CHD9-208ENST00000563410 URGCPQ8TCY9 931 aa23.37■■□□□ 1.33
CHD9-208ENST00000563410 NECTIN4Q96NY8 510 aa23.37■■□□□ 1.33
CHD9-208ENST00000563410 CACNA1HO95180 2353 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 BTBD18B2RXH4 712 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 C2CD4DB7Z1M9 353 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 LYPLA2O95372 231 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 WEE2P0C1S8 567 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 PTENP60484 403 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 PTPN14Q15678 1187 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 RARS2Q5T160 578 aaKnown RBP23.36■■□□□ 1.33
CHD9-208ENST00000563410 FBXL6Q8N531 539 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 PRSS33Q8NF86 280 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 FEZF2Q8TBJ5 459 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 BRMS1Q9HCU9 246 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 DZANK1Q9NVP4 752 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 PCDHA12Q9UN75 941 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 NR2E1Q9Y466 385 aa23.36■■□□□ 1.33
CHD9-208ENST00000563410 PLXNA3P51805 1871 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 TSPAN1O60635 241 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 POMCP01189 267 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 NEFLP07196 543 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 MTHFRP42898 656 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 CALCRLQ16602 461 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 IFNLR1Q8IU57 520 aaPredicted RBP23.35■■□□□ 1.33
CHD9-208ENST00000563410 TMEM175Q9BSA9 504 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 EIF2AQ9BY44 585 aaKnown RBP23.35■■□□□ 1.33
CHD9-208ENST00000563410 TSHZ2Q9NRE2 1034 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 KANSL3Q9P2N6 904 aa23.35■■□□□ 1.33
CHD9-208ENST00000563410 NRP1O14786 923 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 JAK2O60674 1132 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 MRE11P49959 708 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 POU5F1BQ06416 359 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 MXD4Q14582 209 aaPredicted RBP23.34■■□□□ 1.33
CHD9-208ENST00000563410 KIAA1841Q6NSI8 718 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 SUGP1Q8IWZ8 645 aaKnown RBP23.34■■□□□ 1.33
CHD9-208ENST00000563410 DIS3L2Q8IYB7 885 aaKnown RBP23.34■■□□□ 1.33
CHD9-208ENST00000563410 ASAP3Q8TDY4 903 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 RIPOR3Q96MK2 946 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 RNF39Q9H2S5 420 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 TTC12Q9H892 705 aaPredicted RBP23.34■■□□□ 1.33
CHD9-208ENST00000563410 ANKEF1Q9NU02 776 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 FAN1Q9Y2M0 1017 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 IPPQ9Y573 584 aa23.34■■□□□ 1.33
CHD9-208ENST00000563410 INPPL1O15357 1258 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 LILRB3O75022 631 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 ERLIN2O94905 339 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 ALDH2P05091 517 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 ITGA4P13612 1032 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 AXLP30530 894 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 ST3GAL1Q11201 340 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 CAPSQ13938 189 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 PCBP1Q15365 356 aaKnown RBP eCLIP23.33■■□□□ 1.33
CHD9-208ENST00000563410 AMHR2Q16671 573 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 TMEM87AQ8NBN3 555 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 CNNM3Q8NE01 707 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 CPB2Q96IY4 423 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 KLHL5Q96PQ7 755 aa23.33■■□□□ 1.33
CHD9-208ENST00000563410 FAM193BQ96PV7 902 aaPredicted RBP23.33■■□□□ 1.33
CHD9-208ENST00000563410 MTMR9Q96QG7 549 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms