RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ALDH5A1P51649 535 aaPredicted RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 MTMR3Q13615 1198 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 BRD3Q15059 726 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 STILQ15468 1287 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 E2F4Q16254 413 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 ZNF699Q32M78 642 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 TWF2Q6IBS0 349 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 ILDR1Q86SU0 546 aaPredicted RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 MORC4Q8TE76 937 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 ERGIC2Q96RQ1 377 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 KCNMB3Q9NPA1 279 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 STRIP2Q9ULQ0 834 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 MARF1Q9Y4F3 1742 aaKnown RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 NFASCO94856 1347 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 ZNF541Q9H0D2 1346 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 A0A1W2PQJ5 194 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 MIF4GDA9UHW6 222 aaKnown RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 LRRN2O75325 713 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 CYP2B6P20813 491 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 GCLMP48507 274 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 PSEN1P49768 467 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 BFSP1Q12934 665 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 VSIG10LQ86VR7 867 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 ARMC2Q8NEN0 867 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 ZNF384Q8TF68 577 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 RRAGCQ9HB90 399 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 A1CFQ9NQ94 594 aaKnown RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 HOMER3Q9NSC5 361 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 USTQ9Y2C2 406 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 GARTP22102 1010 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 ATP5DP30049 168 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 TCF7P36402 384 aaPredicted RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 ERVK-9P63128 1117 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 ERVK-24P63145 666 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 NFX1Q12986 1120 aaKnown RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 DNAJC24Q6P3W2 148 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 SPIRE2Q8WWL2 714 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 SREK1Q8WXA9 508 aaKnown RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 PCDHA13Q9Y5I0 950 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 CAPN9O14815 690 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 RHOXF2BP0C7M4 288 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.11
TCF4-216ENST00000562680 PDXDC1Q6P996 788 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 FOXR2Q6PJQ5 311 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 MMS22LQ6ZRQ5 1243 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 CD302Q8IX05 232 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 ITFG2Q969R8 447 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 GMLQ99445 158 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 RHOXF2Q9BQY4 288 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 NXF1Q9UBU9 619 aaKnown RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 COL2A1P02458 1487 aaPredicted RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 KCNK3O14649 394 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 CALB1P05937 261 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 MYBL1P10243 752 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 RWDD2BP57060 319 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 RNASELQ05823 741 aaKnown RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 LONRF2Q1L5Z9 754 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 DNAJC21Q5F1R6 531 aaKnown RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 CENPPQ6IPU0 288 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 SESTD1Q86VW0 696 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 SMC1BQ8NDV3 1235 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 NSMCE1Q8WV22 266 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 SYN2Q92777 582 aaPredicted RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 TAF1DQ9H5J8 278 aaPredicted RBP8.11□□□□□ -1.11
TCF4-216ENST00000562680 UBIAD1Q9Y5Z9 338 aa8.11□□□□□ -1.11
TCF4-216ENST00000562680 FRMPD4Q14CM0 1322 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 A6NNZ2 444 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 CAPN2P17655 700 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 PTGER2P43116 358 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 NR1I3Q14994 352 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 TERF2Q15554 542 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 TUBB8Q3ZCM7 444 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 FIGNQ5HY92 759 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 OTOP1Q7RTM1 612 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 ZNF354CQ86Y25 554 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 URGCPQ8TCY9 931 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 ATP8B4Q8TF62 1192 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 SLC24A3Q9HC58 644 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 RRP15Q9Y3B9 282 aaKnown RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 EMSYQ7Z589 1322 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 SLC15A5A6NIM6 579 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 KBTBD13C9JR72 458 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 MEIS2O14770 477 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 C6orf222P0C671 652 aaPredicted RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 CEP57Q86XR8 500 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 NLGN2Q8NFZ4 835 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 PGBD4Q96DM1 585 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 ACAP3Q96P50 834 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 A0A1W2PRG0 241 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 TTC26A0AVF1 554 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 EXTL3O43909 919 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 GTF2H1P32780 548 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 FMO5P49326 533 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 DCAF4L1Q3SXM0 396 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 ELMSAN1Q6PJG2 1045 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 RNF180Q86T96 592 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 PCSK9Q8NBP7 692 aaKnown RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 FUCA2Q9BTY2 467 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 NACA2Q9H009 215 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms