RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 PRMT7Q9NVM4 692 aaPredicted RBP15.25■□□□□ 0.03
CLK3-209ENST00000562670 IMPACTQ9P2X3 320 aa15.25■□□□□ 0.03
CLK3-209ENST00000562670 AKT3Q9Y243 479 aa15.25■□□□□ 0.03
CLK3-209ENST00000562670 FRMD4BQ9Y2L6 1034 aa15.25■□□□□ 0.03
CLK3-209ENST00000562670 KAT6AQ92794 2004 aa15.25■□□□□ 0.03
CLK3-209ENST00000562670 GOLGA6L6A8MZA4 724 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 N4BP3O15049 544 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 AKAP3O75969 853 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 ADSSP30520 456 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 PSMC2P35998 433 aaKnown RBP15.24■□□□□ 0.03
CLK3-209ENST00000562670 GPC3P51654 580 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 MBTD1Q05BQ5 628 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 CCDC40Q4G0X9 1142 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 MIIPQ5JXC2 388 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 SLFN12LQ6IEE8 588 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 ARMCX5Q6P1M9 558 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 CXCL17Q6UXB2 119 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 SRGAP1Q7Z6B7 1085 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 VSTM4Q8IW00 320 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 NME8Q8N427 588 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 XXYLT1Q8NBI6 393 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 ARRDC4Q8NCT1 418 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 BORCS6Q96GS4 357 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 NLRP4Q96MN2 994 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 MRPL4Q9BYD3 311 aaKnown RBP15.24■□□□□ 0.03
CLK3-209ENST00000562670 IFT122Q9HBG6 1241 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 KIAA1586Q9HCI6 787 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 TAB2Q9NYJ8 693 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 HSPBP1Q9NZL4 362 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 HDAC6Q9UBN7 1215 aa15.24■□□□□ 0.03
CLK3-209ENST00000562670 ARMCX3Q9UH62 379 aaPredicted RBP15.24■□□□□ 0.03
CLK3-209ENST00000562670 CNTNAP2Q9UHC6 1331 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 ACKR2O00590 384 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 CLIC2O15247 247 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 PRKCBP05771 671 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 HSPA8P11142 646 aaKnown RBP15.23■□□□□ 0.03
CLK3-209ENST00000562670 CYP2C9P11712 490 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 LIG4P49917 911 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 ACLYP53396 1101 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 HIC1Q14526 733 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 NBPF20Q3BBV1 942 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 SLC9C1Q4G0N8 1177 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 VWA3BQ502W6 1294 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 HS1BP3Q53T59 392 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 INTS8Q75QN2 995 aaKnown RBP15.23■□□□□ 0.03
CLK3-209ENST00000562670 CTU1Q7Z7A3 348 aaKnown RBP15.23■□□□□ 0.03
CLK3-209ENST00000562670 FAM186BQ8IYM0 893 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 BICD1Q96G01 975 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 CBWD1Q9BRT8 395 aa15.23■□□□□ 0.03
CLK3-209ENST00000562670 NOC4LQ9BVI4 516 aaKnown RBP15.23■□□□□ 0.03
CLK3-209ENST00000562670 EVPLQ92817 2033 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 EXOC3O60645 756 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 TOM1L1O75674 476 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 SRGAP2CP0DJJ0 459 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 PROZP22891 400 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 PKN2Q16513 984 aaKnown RBP15.22■□□□□ 0.03
CLK3-209ENST00000562670 CEP135Q66GS9 1140 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 SPECC1LQ69YQ0 1117 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 ZBTB10Q96DT7 871 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 IQCDQ96DY2 449 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 EEF2KMTQ96G04 330 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 ERGIC2Q96RQ1 377 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 IKZF4Q9H2S9 585 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 ADAMTS10Q9H324 1103 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 NDST4Q9H3R1 872 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 PHF24Q9UPV7 400 aa15.22■□□□□ 0.03
CLK3-209ENST00000562670 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLK3-209ENST00000562670 A0A087WZ62 844 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 A0A0B4J269 797 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 ANKRD63C9JTQ0 380 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 DNM1LO00429 736 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 TREHO43280 583 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 CAND2O75155 1236 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 GPR32O75388 356 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 VTNP04004 478 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 GJB1P08034 283 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 CASP4P49662 377 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 CYP2J2P51589 502 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 GSDMDP57764 484 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 TRIM14Q14142 442 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 AMHR2Q16671 573 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 FKBP15Q5T1M5 1219 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 FBXO46Q6PJ61 603 aaPredicted RBP15.21■□□□□ 0.03
CLK3-209ENST00000562670 RUFY4Q6ZNE9 571 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 SERINC5Q86VE9 423 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 SLC43A3Q8NBI5 491 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 SH3TC2Q8TF17 1288 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 POMGNT1Q8WZA1 660 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 SLC35C1Q96A29 364 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 GLT1D1Q96MS3 346 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 ACO2Q99798 780 aaKnown RBP15.21■□□□□ 0.03
CLK3-209ENST00000562670 FDXACB1Q9BRP7 624 aaPredicted RBP15.21■□□□□ 0.03
CLK3-209ENST00000562670 INO80BQ9C086 356 aaPredicted RBP15.21■□□□□ 0.03
CLK3-209ENST00000562670 VPS16Q9H269 839 aa15.21■□□□□ 0.03
CLK3-209ENST00000562670 GRIN2DO15399 1336 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 GTPBP10A4D1E9 387 aaKnown RBP15.2■□□□□ 0.02
CLK3-209ENST00000562670 TISP43B9A030 160 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 INO80B-WBP1J3KQ70 363 aa15.2■□□□□ 0.02
CLK3-209ENST00000562670 ABLIM1O14639 778 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms