RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.1■□□□□ 0.01
GTF3C1-203ENST00000562609 SSU72P8A0A1W2PR75 194 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 BICDL2A1A5D9 508 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 CCDC169A6NNP5 214 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 RAD17O75943 681 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 SNHG28P0DPA3 235 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 PLCG1P19174 1290 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 GSTT1P30711 240 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 MAGEA10P43363 369 aaPredicted RBP15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 JAG1P78504 1218 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 VWA3BQ502W6 1294 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 ASPRV1Q53RT3 343 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 IRGCQ6NXR0 463 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 DEFB132Q7Z7B7 95 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 NOC2LQ9Y3T9 749 aaKnown RBP15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 CLRN2A0PK11 232 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 EDIL3O43854 480 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 RHOBTB3O94955 611 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 CCNB1P14635 433 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 PSMC4P43686 418 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 CNGA2Q16280 664 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 PDXDC1Q6P996 788 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 TRIM42Q8IWZ5 723 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 FAM136AQ96C01 138 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 RMDN2Q96LZ7 410 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 PACSIN1Q9BY11 444 aa15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 LUC7LQ9NQ29 371 aaKnown RBP15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 UTP11Q9Y3A2 253 aaKnown RBP15.09■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L15C9J2P7 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L13C9JLJ4 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L11C9JVI0 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L18D6R9N7 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L22D6RA61 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L17D6RBQ6 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L19D6RCP7 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L20D6RJB6 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 PGRMC1O00264 195 aaKnown RBP15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 UNC5CO95185 931 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 ADCY7P51828 1080 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L24Q0WX57 530 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 USP17L6PQ6QN14 398 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 CABP7Q86V35 215 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 SUPT20HQ8NEM7 779 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 HPS3Q969F9 1004 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 EPB41L4BQ9H329 900 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 NLRC4Q9NPP4 1024 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 FAM114A2Q9NRY5 505 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 ATXN10Q9UBB4 475 aa15.08■□□□□ 0.01
GTF3C1-203ENST00000562609 POTEMA6NI47 508 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 RBAK-RBAKDNI3L0D1 243 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 GJB6O95452 261 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 GSTA2P09210 222 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 SLCO1A2P46721 670 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 SERPINB4P48594 390 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 DENND2CQ68D51 928 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 STYK1Q6J9G0 422 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 CCNJLQ8IV13 435 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 UHMK1Q8TAS1 419 aaKnown RBP15.08■□□□□ 0
GTF3C1-203ENST00000562609 ACTRT1Q8TDG2 376 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 C7orf43Q8WVR3 580 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 TRIM51Q9BSJ1 452 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 PLIN4Q96Q06 1357 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 MYH4Q9Y623 1939 aa15.08■□□□□ 0
GTF3C1-203ENST00000562609 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 RCN2Q14257 317 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 SLC9C1Q4G0N8 1177 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 CCDC84Q86UT8 332 aaPredicted RBP15.07■□□□□ 0
GTF3C1-203ENST00000562609 RBBP8NLQ8NC74 664 aaPredicted RBP15.07■□□□□ 0
GTF3C1-203ENST00000562609 NEK9Q8TD19 979 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.07■□□□□ 0
GTF3C1-203ENST00000562609 TXLNGYQ9BZA5 131 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 O00370 1275 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 NUDT17P0C025 328 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 SIAH1Q8IUQ4 282 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 MIPOL1Q8TD10 442 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.07■□□□□ 05e-7■■□□□ 12.6
GTF3C1-203ENST00000562609 STK32BQ9NY57 414 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 PNMA6FA0A0J9YX94 578 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 CES2O00748 559 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 AGTP01019 485 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 PMS2P54278 862 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 CACNA2D1P54289 1103 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 STK4Q13043 487 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
GTF3C1-203ENST00000562609 FAM13CQ8NE31 585 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 RNF25Q96BH1 459 aaPredicted RBP15.07■□□□□ 0
GTF3C1-203ENST00000562609 GBP5Q96PP8 586 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 CAMKK2Q96RR4 588 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 PABPC3Q9H361 631 aaKnown RBP15.07■□□□□ 0
GTF3C1-203ENST00000562609 ZNF277Q9NRM2 450 aaPredicted RBP15.07■□□□□ 0
GTF3C1-203ENST00000562609 CTTNBP2NLQ9P2B4 639 aa15.07■□□□□ 0
GTF3C1-203ENST00000562609 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.07■□□□□ 0
GTF3C1-203ENST00000562609 CCDC188H7C350 402 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 NVLO15381 856 aaKnown RBP15.06■□□□□ 0
GTF3C1-203ENST00000562609 KCNA3P22001 575 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 SKIV2L2P42285 1042 aaKnown RBP15.06■□□□□ 0
GTF3C1-203ENST00000562609 SESN3P58005 492 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 TMEM62Q0P6H9 643 aa15.06■□□□□ 0
GTF3C1-203ENST00000562609 SLC29A2Q14542 456 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms