RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 VAV3Q9UKW4 847 aa15.06■□□□□ 0
VPS9D1-202ENST00000561976 RIPK2O43353 540 aa15.05■□□□□ 0
VPS9D1-202ENST00000561976 EXOC3O60645 756 aa15.05■□□□□ 0
VPS9D1-202ENST00000561976 SREBF1P36956 1147 aa15.05■□□□□ 0
VPS9D1-202ENST00000561976 CLNS1AP54105 237 aaKnown RBP15.05■□□□□ 0
VPS9D1-202ENST00000561976 SLMAPQ14BN4 828 aa15.05■□□□□ 0
VPS9D1-202ENST00000561976 SHROOM1Q2M3G4 852 aaPredicted RBP15.05■□□□□ 0
VPS9D1-202ENST00000561976 PHLDB3Q6NSJ2 640 aa15.05■□□□□ 0
VPS9D1-202ENST00000561976 ZSWIM1Q9BR11 485 aa15.05■□□□□ 0
VPS9D1-202ENST00000561976 FRMPD4Q14CM0 1322 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 ZBTB39O15060 712 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 FOSP01100 380 aaPredicted RBP15.05■□□□□ -0
VPS9D1-202ENST00000561976 BCRP11274 1271 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 SCP2P22307 547 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 LRRC14Q15048 493 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 ZNF746Q6NUN9 644 aaPredicted RBP15.05■□□□□ -0
VPS9D1-202ENST00000561976 STXBP4Q6ZWJ1 553 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 SYCP3Q8IZU3 236 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 DCAF4Q8WV16 495 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 HOOK2Q96ED9 719 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 CCDC17Q96LX7 622 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 ATP6V0A4Q9HBG4 840 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 UBE2TQ9NPD8 197 aaPredicted RBP15.05■□□□□ -0
VPS9D1-202ENST00000561976 AGPAT3Q9NRZ7 376 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 ABCF3Q9NUQ8 709 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 CEP83Q9Y592 693 aa15.05■□□□□ -0
VPS9D1-202ENST00000561976 KIF1CO43896 1103 aaKnown RBP15.04■□□□□ -0
VPS9D1-202ENST00000561976 KIF22Q14807 665 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 OTUD6AQ7L8S5 288 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 DYDC2Q96IM9 177 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 PCYOX1Q9UHG3 505 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 MTUS1Q9ULD2 1270 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 COMTP21964 271 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 PDE6CP51160 858 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 GPC5P78333 572 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 AUHQ13825 339 aaKnown RBP15.04■□□□□ -0
VPS9D1-202ENST00000561976 CNGA2Q16280 664 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 ODR4Q5SWX8 454 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 C11orf63Q6NUN7 778 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 BTNL9Q6UXG8 535 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 HOMER3Q9NSC5 361 aa15.04■□□□□ -0
VPS9D1-202ENST00000561976 RARGP13631 454 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 CTNNA2P26232 953 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 KCNJ1P48048 391 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 PPP2R5AQ15172 486 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 CDC42EP5Q6NZY7 148 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 C1orf186Q6ZWK4 172 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 ZNF720Q7Z2F6 126 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 RPUSD2Q8IZ73 545 aaKnown RBP15.03■□□□□ -0
VPS9D1-202ENST00000561976 ZDHHC14Q8IZN3 488 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 CFAP73A6NFT4 308 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 ANKRD63C9JTQ0 380 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 UBAP1LF5GYI3 381 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 SPOPO43791 374 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 PYGMP11217 842 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 TCP10Q12799 353 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 NFIAQ12857 509 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 BFSP1Q12934 665 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 CALCOCO2Q13137 446 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 LLGL1Q15334 1064 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 NFIL3Q16649 462 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 LONRF1Q17RB8 773 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 ACCSLQ4AC99 568 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 RUNDC3BQ96NL0 473 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 CCDC134Q9H6E4 229 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 PFASO15067 1338 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 AFF2P51816 1311 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 PASKQ96RG2 1323 aa15.03■□□□□ -0
VPS9D1-202ENST00000561976 A0A1B0GUA9 196 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 TCRBV7S2A1N4TA0A589 114 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 ATMINO43313 823 aaPredicted RBP15.02■□□□□ -0
VPS9D1-202ENST00000561976 UBOX5O94941 541 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 COILP38432 576 aaPredicted RBP15.02■□□□□ -0
VPS9D1-202ENST00000561976 MAP2K1Q02750 393 aaPredicted RBP15.02■□□□□ -0
VPS9D1-202ENST00000561976 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
VPS9D1-202ENST00000561976 CERKLQ49MI3 558 aaPredicted RBP15.02■□□□□ -0
VPS9D1-202ENST00000561976 EXOC3L1Q86VI1 746 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 CERS5Q8N5B7 392 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 MIEF2Q96C03 454 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 STAMBPL1Q96FJ0 436 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 TMEM109Q9BVC6 243 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 AGAP1Q9UPQ3 857 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 ZNF831Q5JPB2 1677 aa15.02■□□□□ -0
VPS9D1-202ENST00000561976 TCP11X1B4DZS4 312 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 SNX3O60493 162 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 BBOX1O75936 387 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 SLITRK3O94933 977 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 ACSL3O95573 720 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 GGPS1O95749 300 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 CIITAP33076 1130 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 HADHBP55084 474 aaKnown RBP15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 NAA25Q14CX7 972 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 SLC15A2Q16348 729 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 LRCH2Q5VUJ6 765 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 ZFPM1Q8IX07 1006 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 RSRC1Q96IZ7 334 aaKnown RBP15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 HSD17B14Q9BPX1 270 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 KCNK9Q9NPC2 374 aa15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.02□□□□□ -0.01
VPS9D1-202ENST00000561976 FGFR1OP2Q9NVK5 253 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms