RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 CRAMP1Q96RY5 1269 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 SMC6Q96SB8 1091 aa20■□□□□ 0.79
RAB40C-206ENST00000561781 MPHOSPH6Q99547 160 aaKnown RBP20■□□□□ 0.79
RAB40C-206ENST00000561781 BUD13Q9BRD0 619 aaKnown RBP eCLIP20■□□□□ 0.79
RAB40C-206ENST00000561781 DLEC1Q9Y238 1755 aa19.99■□□□□ 0.79
RAB40C-206ENST00000561781 EYA4O95677 639 aa19.99■□□□□ 0.79
RAB40C-206ENST00000561781 CYP1A1P04798 512 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-206ENST00000561781 IGHMBP2P38935 993 aaKnown RBP19.99■□□□□ 0.79
RAB40C-206ENST00000561781 LRRC15Q8TF66 581 aa19.99■□□□□ 0.79
RAB40C-206ENST00000561781 RSPH1Q8WYR4 309 aa19.99■□□□□ 0.79
RAB40C-206ENST00000561781 EPB41L4BQ9H329 900 aa19.99■□□□□ 0.79
RAB40C-206ENST00000561781 DENND2DQ9H6A0 471 aaPredicted RBP19.99■□□□□ 0.79
RAB40C-206ENST00000561781 ETNK2Q9NVF9 386 aa19.99■□□□□ 0.79
RAB40C-206ENST00000561781 KRIT1O00522 736 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 ADAMTS3O15072 1205 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 RAD21O60216 631 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 LYNP07948 512 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 TRAPPC10P48553 1259 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 P3H1Q32P28 736 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 SLC9C1Q4G0N8 1177 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 C4orf32Q8N8J7 132 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 ANKS1AQ92625 1134 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 MTA3Q9BTC8 594 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 TBC1D10AQ9BXI6 508 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 PACSIN1Q9BY11 444 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 ARMT1Q9H993 441 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 HSFX1Q9UBD0 423 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 GSG1L2A8MUP6 293 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 TTI1O43156 1089 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 ENTPD5O75356 428 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 CCNFP41002 786 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 TNFAIP8L3Q5GJ75 292 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 GOLPH3Q9H4A6 298 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 MINPP1Q9UNW1 487 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 RTL9Q8NET4 1388 aa19.98■□□□□ 0.79
RAB40C-206ENST00000561781 TNKSO95271 1327 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 A0A0J9YVX5 310 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 KLRK1P26718 216 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 CDK7P50613 346 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 SESN3P58005 492 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 PTPROQ16827 1216 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 ZC2HC1CQ53FD0 456 aaPredicted RBP19.97■□□□□ 0.79
RAB40C-206ENST00000561781 ECHDC2Q86YB7 292 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 SLF2Q8IX21 1173 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 NME8Q8N427 588 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 ANKLE1Q8NAG6 615 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 C7orf43Q8WVR3 580 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 HAUS1Q96CS2 278 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 FAM81BQ96LP2 452 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 OXCT2Q9BYC2 517 aaPredicted RBP19.97■□□□□ 0.79
RAB40C-206ENST00000561781 CCDC113Q9H0I3 377 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 SEMA6BQ9H3T3 888 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 NLRC4Q9NPP4 1024 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 TMOD4Q9NZQ9 345 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 NOC2LQ9Y3T9 749 aaKnown RBP19.97■□□□□ 0.79
RAB40C-206ENST00000561781 PRKAB2O43741 272 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 TLR2O60603 784 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 BCRP11274 1271 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 ITGA4P13612 1032 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 USP11P51784 963 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 GPSM2P81274 684 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 HPCAP84074 193 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 CHRNDQ07001 517 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 MGAT5Q09328 741 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 MAN2A1Q16706 1144 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 TMEM259Q4ZIN3 620 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 DAB2IPQ5VWQ8 1189 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 CELF4Q9BZC1 486 aaKnown RBP19.97■□□□□ 0.79
RAB40C-206ENST00000561781 EDEM3Q9BZQ6 932 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 UBA5Q9GZZ9 404 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 USH1CQ9Y6N9 552 aa19.97■□□□□ 0.79
RAB40C-206ENST00000561781 PASKQ96RG2 1323 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 hCG_2014768A0A024R1R8 64 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 SMIM23A6NLE4 172 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 OXCT1P55809 520 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 PLOD1Q02809 727 aaPredicted RBP19.96■□□□□ 0.79
RAB40C-206ENST00000561781 PRPF4BQ13523 1007 aaKnown RBP19.96■□□□□ 0.79
RAB40C-206ENST00000561781 PPP2R5BQ15173 497 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 LRRC74BQ6ZQY2 392 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 ARHGAP27Q6ZUM4 889 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 DDX43Q9NXZ2 648 aaKnown RBP19.96■□□□□ 0.79
RAB40C-206ENST00000561781 DDX25Q9UHL0 483 aaKnown RBP19.96■□□□□ 0.79
RAB40C-206ENST00000561781 MAP3K7O43318 606 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 SPATA31D3P0C874 917 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 POTEJP0CG39 1038 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 RTP1P59025 263 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 AP1B1Q10567 949 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 SEC23AQ15436 765 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 RBM26Q5T8P6 1007 aaKnown RBP19.96■□□□□ 0.79
RAB40C-206ENST00000561781 SPATA31D4Q6ZUB0 917 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 CKAP2Q8WWK9 683 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 HPS3Q969F9 1004 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 MYLK2Q9H1R3 596 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 DHX36Q9H2U1 1008 aaKnown RBP19.96■□□□□ 0.79
RAB40C-206ENST00000561781 TBC1D30Q9Y2I9 924 aa19.96■□□□□ 0.79
RAB40C-206ENST00000561781 TRAFD1O14545 582 aaPredicted RBP19.95■□□□□ 0.78
RAB40C-206ENST00000561781 SUPT3HO75486 399 aa19.95■□□□□ 0.78
RAB40C-206ENST00000561781 SERPING1P05155 500 aa19.95■□□□□ 0.78
RAB40C-206ENST00000561781 MARK3P27448 753 aa19.95■□□□□ 0.78
RAB40C-206ENST00000561781 UBA7P41226 1012 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms