RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 SEMA3BQ13214 749 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 PCSK4Q6UW60 755 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 Q6ZS52 159 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 HDDC3Q8N4P3 179 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 WHAMMQ8TF30 809 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 BCL7CQ8WUZ0 217 aaPredicted RBP10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 DNAJC2Q99543 621 aaKnown RBP10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 C2orf42Q9NWW7 574 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 DNMT3LQ9UJW3 386 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 AHCTF1Q8WYP5 2266 aa10.94□□□□□ -0.66
AC010542.3-202ENST00000561728 ABCB11O95342 1321 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 CCDC194A0A1B0GVG4 234 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 PATE3B3GLJ2 98 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 TEX28O15482 410 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 C6P13671 934 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 CCNE1P24864 410 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 ADD2P35612 726 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 SERINC3Q13530 473 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 PRICKLE2Q7Z3G6 844 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 NME8Q8N427 588 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 PNPLA1Q8N8W4 532 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 EAF2Q96CJ1 260 aaPredicted RBP10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 PDCD2LQ9BRP1 358 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 VN1R3Q9BXE9 311 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 ERAP1Q9NZ08 941 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 PCDHA1Q9Y5I3 950 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 LRRK2Q5S007 2527 aa10.93□□□□□ -0.66
AC010542.3-202ENST00000561728 NUP205Q92621 2012 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 DOCK6Q96HP0 2047 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 FBN3Q75N90 2809 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 MEFVO15553 781 aaPredicted RBP10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 GAS2O43903 313 aaKnown RBP10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 FTH1P19P0C7X4 201 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 NTHL1P78549 312 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 KARSQ15046 597 aaKnown RBP10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 GNPTABQ3T906 1256 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 CYP2U1Q7Z449 544 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 ECHDC2Q86YB7 292 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 IRF7Q92985 503 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 NUSAP1Q9BXS6 441 aaKnown RBP10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 PLA2G2FQ9BZM2 168 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 PCDHA2Q9Y5H9 948 aa10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 COL5A1P20908 1838 aaPredicted RBP10.92□□□□□ -0.66
AC010542.3-202ENST00000561728 MGAQ8IWI9 3026 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 TTLL13PA6NNM8 815 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 GALTP07902 379 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 ZSCAN20P17040 1043 aaPredicted RBP10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 CCND2P30279 289 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 GBP1P32455 592 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 TCF7P36402 384 aaPredicted RBP10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 ZNF76P36508 570 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 IL12RB1P42701 662 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 GRM2Q14416 872 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 DGKKQ5KSL6 1271 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 PDXDC1Q6P996 788 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 ZNF574Q6ZN55 896 aaPredicted RBP10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 VSIG10LQ86VR7 867 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 PALB2Q86YC2 1186 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 ZNF280BQ86YH2 543 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 ITFG1Q8TB96 612 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 TMEM40Q8WWA1 233 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 SSH1Q8WYL5 1049 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 TRIM4Q9C037 500 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
AC010542.3-202ENST00000561728 GOLGA4Q13439 2230 aaKnown RBP10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 WDR81Q562E7 1941 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 SURF6O75683 361 aaKnown RBP10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 ZMYND10O75800 440 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 INSRRP14616 1297 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 ATXN3P54252 364 aaPredicted RBP10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 RNASELQ05823 741 aaKnown RBP10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 DSC3Q14574 896 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 PGM5Q15124 567 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 TRIP6Q15654 476 aaKnown RBP10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 GIMAP6Q6P9H5 292 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 C1orf228Q6PIY5 440 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 FAM228AQ86W67 206 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 FMNL3Q8IVF7 1028 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 NPAS3Q8IXF0 933 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 TRMT61BQ9BVS5 477 aaKnown RBP10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 GBP3Q9H0R5 595 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 POLIQ9UNA4 740 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 SLC8A2Q9UPR5 921 aa10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 APOBEC2Q9Y235 224 aaKnown RBP10.9□□□□□ -0.66
AC010542.3-202ENST00000561728 SMIM35A0A1B0GVV1 85 aa10.89□□□□□ -0.67
AC010542.3-202ENST00000561728 TRABD2BA6NFA1 517 aa10.89□□□□□ -0.67
AC010542.3-202ENST00000561728 TSPY2A6NKD2 308 aa10.89□□□□□ -0.67
AC010542.3-202ENST00000561728 RRP8O43159 456 aaKnown RBP10.89□□□□□ -0.67
AC010542.3-202ENST00000561728 TGM5O43548 720 aa10.89□□□□□ -0.67
AC010542.3-202ENST00000561728 EXTL3O43909 919 aa10.89□□□□□ -0.67
AC010542.3-202ENST00000561728 TDO2P48775 406 aa10.89□□□□□ -0.67
AC010542.3-202ENST00000561728 SLC11A1P49279 550 aa10.89□□□□□ -0.67
AC010542.3-202ENST00000561728 LY6DQ14210 128 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms